AMCG00011239


Basic Information

Item Value
gene id AMCG00011239
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 15080384 ~ 15130043 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011239
ATGGTTCTACACCGTGGGAAACAGTTTGAGCTAGGGGCATGGACAAATGGCTGGACGCAGGCTGAGAAAGCAGGCCATCTTGCAAAAGCATTGGAGGGGCGGGCTCAACAGGTGCTGCAAGACGTCACTCTACAAGAACGTCACCAATTCTCAGCCCTGGCTGCAGCTCTTCGCAGGCGTTTTGGTGAGGAAGAGACGGCTGAAAAGCTGTCTGAAAAAAGAAGACAGGTGGGCGAAAAACTCGGTGCGCTTGCTGCAGACTTGAACTTCTTAGTGAAGAAAAGCTATCCTGACAAGCTGGCTTTACAAGCTTTCCTACGTGCATTAACCCCTGAAAACCTGCGGCAGCAAGTGCGTCTCACAGCTCCTGTTTCACTGGATCAAGCATTAGAGCAAGCAAAGAGAATTGAAGCAGTAATGAGGGACAGTTATAGCGGGCAGGCACGTAGCCAAGTTTTAACCTGTCGAGCTGGGGAAGACGTTTACGATGAAAGTGAGGGGGAACTGTGTGTCAAGCCATGTCAGCTGAACAAATACAGCGCCTTTGCTGTCGGCGCTGTGGCAAGAAGGGCCATTTTGCTTATGAATGCCGTAGCCCACTGCCACGCAACACCTCGGAACGGCCAACGGGACGATATAAAAGGGGGATCACTGTCCTGTccttcctctccccctccctatGCTGAAACCACTGCAATCGTTGGCCGGATCAGGCAGGGCCGCAGCCTCTTTCTCTCCTGCAGCCTGGAGGGGGAGGCTTGCAGAGCCTTGATTGACACAGGCTCTACCATCTCCATCGTCCGTCCTGACCTCCTCCCACCACACGATGAAGACGCATTGACTGCTTGGAAGCCCACCCAGGCGCAACACTTGAGCTCTGCAGTGCTGAACTGCATGCTGGGAAGACCAGAGTACAGCTGGAGGCTGGCAACGAAAAGATGGGATCTCCATCTCTTCCATGAGGGAGTCCCCACAACAGCAACGGGGGGAAGATGGCCAGCCCCCCCTTGGACTAGAAGTGTCGTCTACAGCAGCGCAGGAGTCCAGATCAAAGGGGCCATCAGAAGAGACACTACAGGCAGTGCAGGAGCAGCAATCCACAGCAATGCGGACGCATTATCCCGCCGCCCCTGCGAGACAGAGGCCTGCTGCCACTGGGAGGGGTACGTGGAGTCGGGGAAGGGGGTCAGGGGCCATTGGCGGTTAGAGGTTTACAAGCCAGTGACAGAGCCTGttgtctccatctctgtcttctcctcctcctcctcctcctcctcctcctcctccaccttctCTCTATTCTCCCAGTACCCAACTGAAGCTGCTGACAAGAATCCCATTCCTTTGAGGTTCTCGTCATCTCCGAATCTGGAACAcatATCCCTGAAGAGTGAAACTGCCAAGCATACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011239 True 1410 mRNA 0.55 7 15080384 15130043

Neighbor

gene id symbol gene type direction distance location
AMCG00011233 gabrb2l,LOC106567507,LOC105011225,LOC107661674,LOC107578857 coding downstream 190079 14884434 ~ 14890305 (-)
AMCG00011232 LOC103038806,LOC108413784,LOC107661674,LOC105011225,LOC106567507 coding downstream 246742 14823524 ~ 14833642 (-)
AMCG00011229 NA coding downstream 378955 14688179 ~ 14701429 (-)
AMCG00011231 NA coding downstream 403960 14649378 ~ 14676424 (-)
AMCG00011230 NA coding downstream 504356 14546071 ~ 14576028 (-)
AMCG00011238 NA coding upstream 105582 15235625 ~ 15238725 (-)
AMCG00011237 sept8,LOC103475354 coding upstream 117149 15247192 ~ 15272628 (-)
AMCG00011245 NA coding upstream 152534 15282577 ~ 15295505 (-)
AMCG00011246 NA coding upstream 198293 15328336 ~ 15346964 (-)
AMCG00011244 NA coding upstream 231273 15361316 ~ 15364890 (-)
G105213 NA non-coding downstream 25567 15054416 ~ 15054817 (-)
G105187 NA non-coding downstream 151335 14928801 ~ 14929049 (-)
G105176 NA non-coding downstream 190947 14889226 ~ 14889437 (-)
G105112 NA non-coding downstream 630603 14447338 ~ 14449781 (-)
G105107 NA non-coding downstream 645717 14427419 ~ 14434667 (-)
G105249 NA non-coding upstream 103660 15233703 ~ 15300851 (-)
G105261 NA non-coding upstream 168602 15298645 ~ 15322712 (-)
G105291 NA non-coding upstream 243304 15373347 ~ 15374763 (-)
G105282 NA non-coding upstream 255673 15385716 ~ 15404233 (-)
G105298 NA non-coding upstream 261689 15391732 ~ 15396392 (-)
G105050 NA other downstream 1011823 14067215 ~ 14068561 (-)
AMCG00011211 NA other downstream 1083795 13993983 ~ 13996589 (-)
G104929 NA other downstream 1401122 13665795 ~ 13679262 (-)
G104909 NA other downstream 1713310 13365083 ~ 13367074 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other downstream 2124117 12942390 ~ 12956267 (-)
G105290 LOC108429417 other upstream 240359 15370402 ~ 15373179 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other upstream 369491 15499534 ~ 15515675 (-)
AMCG00011259 pcbd2,LOC107386701,LOC105890513,LOC106941140,LOC103129816 other upstream 833295 15963338 ~ 15973872 (-)
AMCG00011271 LOC107562913 other upstream 913328 16043371 ~ 16098179 (-)
AMCG00011290 rbm27,LOC106567487 other upstream 1813889 16943932 ~ 16961069 (-)

Expression


Co-expression Network