AMCG00011257


Basic Information

Item Value
gene id AMCG00011257
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 15649737 ~ 15664041 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011257
ATGGATCTCGCGCCCGGACTGGCGACCCTCGTGCTGGTGCCCCTCTTCCTGCACGCCCACGGCCTGTACATCGGCGCTGGCAAAGATTCACTCCAGGGGTTGCTTGGAGAGTATGGAGTCGTGACACCGATCAGCACGGACGCTGATGGCCGGTTCTTGTCCCGTGACTTGTCGGCTGATAATGGACGTAGGCGCTGGAAAAGGGATTCCACTGAGGGTCCCAGGGACAGGCTCTTCTACAATGTCACGGTGTTTGGGAGGGAGTTTCACCTGAGGCTCAGGCTGAACTCGCGCCTGGTGGCACCGGGAGCTAAGATTGAGTGGCAGGAGGATAGTAACCGGACACGCTCGGAGCCTTTACATGCAGATTGCCTCTATGTTGGAGATGTCACAGACATGGAAGGGGCTACTGTTGCCATAAGCAACTGTGATGGTCTGTGTTATTCTTACAGCACGTGGAAAAAGTGTAAACCCTTGGCTCGAAGAATTAACAGCCTCACCGTGGCAGACAAAGTGTTTGAGGTCCACAGTCATCCCGGGGGCTTCTATTACACAGCCATGGCAGAGATCGAGGCATGGGGTGattaa

Function

GO:

id name namespace
GO:0040007 growth biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011257 True 588 mRNA 0.55 3 15649737 15664041

Neighbor

gene id symbol gene type direction distance location
AMCG00011249 cnot6 coding upstream 83881 15556848 ~ 15565856 (+)
AMCG00011247 ndfip1,LOC106567495 coding upstream 245515 15389603 ~ 15404222 (+)
AMCG00011242 NA coding upstream 268136 15377266 ~ 15381601 (+)
AMCG00011243 LOC108429417,LOC100380717,LOC108430974 coding upstream 274869 15365147 ~ 15374868 (+)
AMCG00011240 NA coding upstream 332034 15314882 ~ 15317703 (+)
AMCG00011254 NA coding downstream 91245 15755286 ~ 15799493 (+)
AMCG00011256 NA coding downstream 161572 15825613 ~ 15826569 (+)
AMCG00011258 pitx1 coding downstream 284598 15948639 ~ 15953777 (+)
AMCG00011262 sar1b,LOC107603246,LOC107713617,LOC107668454,LOC107657201 coding downstream 367033 16031074 ~ 16033025 (+)
AMCG00011270 NA coding downstream 455827 16119868 ~ 16124691 (+)
G105238 NA non-coding upstream 365989 15280455 ~ 15283748 (+)
G105226 NA non-coding upstream 393115 15249738 ~ 15256622 (+)
G105186 NA non-coding upstream 720797 14928643 ~ 14928940 (+)
G105145 atp10d,atp10b non-coding upstream 978188 14671298 ~ 14671549 (+)
G105144 NA non-coding upstream 978809 14670719 ~ 14670928 (+)
G105365 NA non-coding downstream 157267 15821308 ~ 15839105 (+)
G105370 NA non-coding downstream 195717 15859758 ~ 15861690 (+)
G105390 ddx46 non-coding downstream 332336 15996377 ~ 15997732 (+)
G105434 NA non-coding downstream 392124 16056165 ~ 16056449 (+)
G105436 NA non-coding downstream 398873 16062914 ~ 16063749 (+)
AMCG00011250 NA other upstream 162365 15472259 ~ 15487372 (+)
AMCG00011241 LOC102221627,LOC107740141,LOC107680337,LOC107593202 other upstream 327079 15320780 ~ 15322658 (+)
G105139 LOC100846954 other upstream 1029203 14619690 ~ 14620534 (+)
AMCG00011209 cpeb4,LOC106603870 other upstream 1588710 14013121 ~ 14061027 (+)
AMCG00011210 bod1,LOC107581912,LOC107661728,LOC107713186,LOC107662284,LOC107587245,LOC108278584,LOC106603873 other upstream 1656892 13985665 ~ 13992845 (+)
AMCG00011253 NA other downstream 186605 15850646 ~ 15852389 (+)
AMCG00011252 NA other downstream 189723 15853764 ~ 15855784 (+)
AMCG00011255 LOC106603967,LOC105011194,LOC108410970 other downstream 198991 15863032 ~ 15873489 (+)
G105373 cssa04h5orf24,pcbd2,LOC105890513,LOC100699409 other downstream 299299 15963340 ~ 15984079 (+)
AMCG00011268 NA other downstream 441545 16105586 ~ 16110381 (+)

Expression


Co-expression Network