AMCG00011261


Basic Information

Item Value
gene id AMCG00011261
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 15802473 ~ 15937457 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011261
atgaaCAGGGACAACAAGAAGGCAAaaaaagagACGTCGAGCAGTGAAGCATTGATGGGGTTGTGGGGTGGGGTAGACTTCGACTTCCATCAGGCCTCTGCTGAGGATACGGTGCAGGATTTCACGCTGGCCCTCATCAGCAGTATGGAGTTTCCGTTACTGAGAGTCTCTTCACTTGCTGAGCCTGATGAGTGTAATTCTGGGCAGCTGCTCTTCCGCTGCCTGAGGCGAGGAGAGCAGAGTCTTGGGAAGCTGTTTGCCCGTGGGAGGCTGCACGAGGCATTCGTGGAGGCGGGTTGCAAGATCTCTGTGGTTTGCGAGTCCAAATCTTCTCCTCCATTTAGCcccctgttgttgctgttggtGACTTCGAAGGACGAGTTGTTCTTTCCATACAGGAATTCCAAAGGCACTGGGATGACTCGCTGGCGGGAATATCCTGACCTTCTCAGTGTGGATGAAGAGCAGCCTCAGGGCTTCCCAGAAGGTATGAAAGTGCAGCTGTGGTCTCAGTCATCAGAGACCATGAGAGCACTGCTGCACAGAGGAAATGATGCAATATTATTGAGACGGGGGAAAAGCCAAAATGACCTGGAAACACTGCGCAACACGCCGGGCTACGTCAATGAACACCTTTACAATTACAAGacGTCTGTTTTCACGCCACAGTACGGGCAAACATCCAATATTAGCACAGACAGCAGCAAGACCACTCCAGAAGTGATAACCCAGATCCTGCAGAAATACAAGATACAAAACAGCCCGGAGGAATTTGAACTCTATATTGTTCGAGCAACAGGAGAAACGAAAAGGATCAAGGACTGTGAATGCCCACTTCTCATCAAAGTGATGAATGGGCCAGACCCAAGGGTGGCCAGAATATCACTGATGGATAAGGGTCAGGGCAAGGAAGTGGGATATGATCTGGCTGACTTCCATGACCAGAAGTCCTATGTGCCTGTGCATATGGGCAGTGCTGTGCCTAAGATTGTATTCTGTGCAAAACAGGTGGCTCAGTATCTCAATTTCGAACTGCCTGAGCTGCACTCCATTCTTAAGAAGCTGGATGAAGAAGAACAACAGCTGAAATGTGCAGTATCAGATAAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011261 True 1110 mRNA 0.49 12 15802473 15937457

Neighbor

gene id symbol gene type direction distance location
AMCG00011248 NA coding downstream 358348 15443190 ~ 15444125 (-)
AMCG00011244 NA coding downstream 437583 15361316 ~ 15364890 (-)
AMCG00011246 NA coding downstream 455509 15328336 ~ 15346964 (-)
AMCG00011245 NA coding downstream 506968 15282577 ~ 15295505 (-)
AMCG00011237 sept8,LOC103475354 coding downstream 529845 15247192 ~ 15272628 (-)
AMCG00011260 NA coding upstream 37574 15975031 ~ 15977007 (-)
AMCG00011263 cssa04h5orf24 coding upstream 41240 15978697 ~ 15985898 (-)
AMCG00011265 ddx46,LOC107757870,LOC107571605,LOC107713612 coding upstream 49621 15987078 ~ 16000017 (-)
AMCG00011266 NA coding upstream 62687 16000144 ~ 16004390 (-)
AMCG00011264 sec24a,LOC102796029 coding upstream 67515 16004972 ~ 16024749 (-)
G105326 NA non-coding downstream 233349 15535370 ~ 15569124 (-)
G105282 NA non-coding downstream 398240 15385716 ~ 15404233 (-)
G105298 NA non-coding downstream 406081 15391732 ~ 15396392 (-)
G105291 NA non-coding downstream 427710 15373347 ~ 15374763 (-)
G105261 NA non-coding downstream 479761 15298645 ~ 15322712 (-)
G105427 sar1b,LOC106940938,LOC107657201 non-coding upstream 94794 16032251 ~ 16035023 (-)
G105454 zgc:56064,LOC102205414,LOC107684868,LOC107564119 non-coding upstream 201642 16139099 ~ 16141338 (-)
G105473 vdac1,LOC106567523,LOC107557296 non-coding upstream 298671 16236128 ~ 16237685 (-)
G105479 NA non-coding upstream 307239 16244696 ~ 16247301 (-)
G105553 NA non-coding upstream 717790 16655247 ~ 16725153 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other downstream 286798 15499534 ~ 15515675 (-)
G105290 LOC108429417 other downstream 429294 15370402 ~ 15373179 (-)
G105050 NA other downstream 1733912 14067215 ~ 14068561 (-)
AMCG00011211 NA other downstream 1805884 13993983 ~ 13996589 (-)
G104929 NA other downstream 2123211 13665795 ~ 13679262 (-)
AMCG00011259 pcbd2,LOC107386701,LOC105890513,LOC106941140,LOC103129816 other upstream 25881 15963338 ~ 15973872 (-)
AMCG00011271 LOC107562913 other upstream 105914 16043371 ~ 16098179 (-)
AMCG00011290 rbm27,LOC106567487 other upstream 1006475 16943932 ~ 16961069 (-)
AMCG00011313 NA other upstream 1780169 17717626 ~ 17751099 (-)
G105770 NA other upstream 1813796 17751253 ~ 17751502 (-)

Expression


Co-expression Network