AMCG00011273


Basic Information

Item Value
gene id AMCG00011273
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 16198120 ~ 16199539 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011273
ATGCCTCAGCTGAATAGCGGCGGAGGGGATGATCTCGGCGCTAACGACGAGATGATCTCCTTCAAGGACGAGGGGGAGCAGGACGAGAAGATCCCGGAGAACGCGCTGACCGAGCGGGACCTGGCGGACCTGAAGTCGTCCCTGGTACACGAGTCGGAGATCCACCAGGGCGCTGCGGCGGCGGCGGACCCGGGGGTGAGAGAGCCGCAGCCGCGCCGTGGCGGATCCGCCATCAGACGTGCACAGCAGGAGGAGCACAGGCTTTACGCGGACAAGCACAGAGACCATCTGGAGGACGTGACTAAACGTCAAGATGCAGGAATGTACAAAGCTTCTGCCTATTCTGGATACCCATTTCTGATGCTGCCTGACTCGTACATCCCTAATGGATCTATGTCTCCATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011273 True 405 mRNA 0.60 3 16198120 16199539

Neighbor

gene id symbol gene type direction distance location
AMCG00011274 tcf7 coding downstream 21054 16149736 ~ 16177066 (-)
AMCG00011272 ube2al,ube2a,ube2b,LOC105934920,LOC103029486,LOC103021436,LOC104955100 coding downstream 83161 16110270 ~ 16114959 (-)
AMCG00011264 sec24a,LOC102796029 coding downstream 173371 16004972 ~ 16024749 (-)
AMCG00011266 NA coding downstream 193730 16000144 ~ 16004390 (-)
AMCG00011265 ddx46,LOC107757870,LOC107571605,LOC107713612 coding downstream 198103 15987078 ~ 16000017 (-)
AMCG00011279 rapgef6 coding upstream 341118 16540657 ~ 16579592 (-)
AMCG00011281 NA coding upstream 437757 16637296 ~ 16664404 (-)
AMCG00011283 NA coding upstream 465374 16664913 ~ 16699921 (-)
AMCG00011284 NA coding upstream 546058 16745597 ~ 16746212 (-)
AMCG00011282 NA coding upstream 554117 16753656 ~ 16764495 (-)
G105454 zgc:56064,LOC102205414,LOC107684868,LOC107564119 non-coding downstream 56782 16139099 ~ 16141338 (-)
G105427 sar1b,LOC106940938,LOC107657201 non-coding downstream 163097 16032251 ~ 16035023 (-)
G105326 NA non-coding downstream 628996 15535370 ~ 15569124 (-)
G105282 NA non-coding downstream 793887 15385716 ~ 15404233 (-)
G105473 vdac1,LOC106567523,LOC107557296 non-coding upstream 36589 16236128 ~ 16237685 (-)
G105479 NA non-coding upstream 45157 16244696 ~ 16247301 (-)
G105553 NA non-coding upstream 455708 16655247 ~ 16725153 (-)
G105607 NA non-coding upstream 694421 16893960 ~ 16895074 (-)
G105701 NA non-coding upstream 1110251 17309790 ~ 17312068 (-)
AMCG00011271 LOC107562913 other downstream 99941 16043371 ~ 16098179 (-)
AMCG00011259 pcbd2,LOC107386701,LOC105890513,LOC106941140,LOC103129816 other downstream 224248 15963338 ~ 15973872 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other downstream 682445 15499534 ~ 15515675 (-)
G105290 LOC108429417 other downstream 824941 15370402 ~ 15373179 (-)
G105050 NA other downstream 2129559 14067215 ~ 14068561 (-)
AMCG00011290 rbm27,LOC106567487 other upstream 744393 16943932 ~ 16961069 (-)
AMCG00011313 NA other upstream 1518087 17717626 ~ 17751099 (-)
G105770 NA other upstream 1551714 17751253 ~ 17751502 (-)
G105793 NA other upstream 1800129 17999668 ~ 18000445 (-)
AMCG00011316 LOC107664359,LOC107560145,LOC108427843,LOC107752026,LOC105007072,LOC103354679 other upstream 1981107 18180646 ~ 18191195 (-)

Expression


Co-expression Network