AMCG00011304


Basic Information

Item Value
gene id AMCG00011304
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 17379726 ~ 17395987 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011304
tttaagaAGTTCCAACACCACCCCGCAATGGCGGCAGTAATGATCGATTGCGAGCCGGACCACATCGCGACAGAGCACACACATGCTGTGTCTCCCAAATCACGCAAAgttttttttttcacagattacCCCTATCTGACAGCGCTTGTGTACATCTTGGATGCTGTCTTCATCTTGAACATCGCCTCTCATTTTTACATTGACTTTGAGTCTGAATGGCGCACTGTCACCAGTCAGGTACGAGTCCAGTACCTCAAAGGCTGGTTCCTGCTTGATGTGCTGTGCGTCCTTCCCCTCGAGTTGGTGATGTTTCAGTATGGATATTCCTTCTATTTTTACCTAAACCGTGCTCTGAAGATCGTTGGGTTGTTTCACTATATGGCATCCCTGGAGAAACATCTGGATGTCAATAAGGTGTACCTGGCGGCCTTCAGATACACCTGGGTTCTACTCCTGTGTATCCAGTTTGCAGCGTGCGGCTGTTACGGTGATATCTATCCAACCGACCTGGAAGAAATGTTTTACACAACCTTTTGGATGGTAGTTGGATTGGTAGCCATTACTGGGCACATTGTAACTGGCATGAGCTCAATTTGTGCCAACCTTGATGCTCGCAGAGGGCGTTTTTACCATCGTCTTCAGACTATCAAGACATACATGagAGAGACAGGCTTGCCTCTAGACATGCAAACCTGGgtttatgatttttatatttatctatgGAGACATCAAAAGGGCAGCGTATCCAACAAATTAGTGGAAGACCTCCCCTTTAATCTGCACTCAGAAATCTCCTCAGAGTGTCACCAGGCAATTCTGAGACAAGCCGCTCTGTTCCAGGACACTGGCGAAGCCTTCCAGAGGGTGCTGTCAGTCAAACTTAAAACCATCACCTACAGCCCTGGGCAAATCCTTGCCAAGGCAGGGGACATTGTTCAATCCATGCACTTCATTCAGCATGGGCGTGTACAGGTTTATCTAACGGGTGAAATTCCACGAAATGTCACAATTGTTGCTGAGACCGTGTGTGAGGCCTGTGTGCTGGAGCTCAAAGACCTTGGCATGGAGTTTGCACATTTTCCACAAGATCATGCGACGCTCAGACGCACAGCAGAGCAGCTCCTTCAAAGCATGTCCCGTCCAATCATGAGCGCAGATGATATCGGGGTAGCCACCAATCCCCAGAGCGTGATCATGGACAGGGATCTGTCCGGTCATCCAATACCCTTTTGGAAGAAGACGATAAGCCCAGACTGCAAGTTTGTCCAAACATGGGAAATAGTTACCTTTTTGTGCTTggccatttttgtatttatacagtTGTGGATGGTGTTTTTTACACACTATGATGGGACAGCAGGGTTTCAAAGTGAAGGTCGGGCAGAATTTTTCCTGGCAGTGAGCTGGATTGCTGATGTTGTAGCTGTTCTGGACATCGTCTTCCGCTGTTGTACGCAGGTCCATTCTAATGATGGCTACTTATTAGAGTTTAAAAGTATCTTCAATCACTATGTGCACTCCTGGGATCTGGTTTTCGATGTGCTGACCTTCTTCCCTTTTGATGTGTTCTCCTTCTTCACGGCTCAGAAGCAGTGGGCTGTGTTCAGACTGAACCGCCTGCTATGGATTCGGAAGctgttttcatttttcgcaaaaaatgaaaaaaacccAGAGAAGAATTGGATAGAGTACAGGACAGCGAAGTGTGCATTTCTTCTGTTACTTGCTGTGCACTTTTGCGCCGGACTTTTCTACCTGCAAGGCTGCTATTATACAAGGTGCGATGAAGACACCTGGGCGTGGGATAATGGACTTGGAGCATGCCAGTCCCACTTCTACCACTACGTCGTCACATTCTACTGGGCCATAACTACGATGACAACCACAGGGTTCGGTGATATTACGGCCAGCACTCTTTCAGAGCAGATAGTGACCATCTTTGTGTGCATCATCGGGCTCTTTGTTTTCAACTACCTCAATAGCCTAATTTCTGCCACACTGGCAAGTACAAATTCGGCCAGgtTTACCTTTCAGGACAATCTCCGAGCCGTGACCCAATTCATGAAAAGCCACAAGCTCAGCCAGTCTCTGCAGGACAGGGTGATAGATTACATGAGCCTTCTTTGGGAGAAATACCAGGGGCAGGCGTTCCCAGGCAGCCCTTTCCTGATGCATGACCTGCCCAGTGAGCTGCAGGAAGTCATCCTCATGGAGGAGCGAGGCAAGCTTCTGTCCAAGTACCGTTATTTTAAGGAAGCTGGAGATTCATTAATTAGGGATATTGCCACAGTATCCACAATGTACTTCTATCCCAGAGGAGAGATCATACAGTACAAAGACTGCATCACTCGCGAGCTCTTCTTCATCAAGGAGGGAACTTGTCAGATCTTAAACGACAATTTCTCTGACATTATGGGATTTCTATGCGCAGGAACATATTTTGGAGAGggCGGGTTCTTATATGGGAAACCAGCACAAAGGATTGTGCGTGCCCAAACAATGTGCCAAGTTATTGTCATTGACTTTGACAGACTGAAACCAATTCTTGACAATCATCCAGTCATTAAAAGccAATTCGAAAGACTGCAGGCAGAGTGTCTTCAGTCCTCTGAATGTGTATGGTTGAGAAAGGAACCACAgataattaaaactgtaaaccTGTCGTGTGTTGGCCGCCAATTCCACGAGAAGTCCAAATGCTACGTAGAGGACTTTGGCATCTTCGAAATGTATGCGGGCAATGAAGAGGAGCATGTGGAGGCTCTCAGGCAGACCAGTCAGACTCAACCAGAGCGTGCTATAATCCCCAACGGCTCACGTCTTTTCTGGTGGGAGTGTTTCCGTCTCCTCCTGGCGTTAACGATCTGCGCTGTGTCTTCCCTCCTGTGGTCATTCCTGCACTTTCAGCAAGACCTTTGGAAAGCCTTAGTCTTCCTGCTGATCGTCTGCTGGATTGACATGTACATTCGGCTACATGTGGCGTTTTCTCGGGGCTCCAGGGTGGTTGTGGATACCGTGGAAACAGCCAAGCAATACCTGAAGACCGGCTTCCTGATGGACTTCGTGAGCTGCTTTCCGTGGGAAGTGTTTGGCTTGATGGCAGTATCTACATATGATGACAATAACACATTCTTCAACAATACAAGAGCACTGCACATCATTGCCTTCTTCAGTTTACCCCACATGCTGCAGCTGTATCGAGTCAACTGCACGTTTAAGCACTGGCAGGCCGGAGTCGCAACAGAAAAGACGGCAGTGAGTTTATTGAAGTTTTGTTTGTACGCCATGCTTTTTCTCCACTTCTGCACCTGCGTTGTGTTTGCAGCAGTTTGCCCTCCTGGGACAGACTTCAGCAGTAAGAGTGGAGACAAGTACTTCCTGCCAAAGATCCAACACAACTGCACTGCAGACTCCTGGGTGATGCACTTGGACAATTTATATGGCCTCGATTTTGACACTGTGAGTTTCCCATACCTGTACACAATCTCTCTGTACTTCATCACAGCAACCGTGACTACTGTTGGCTATGGGGACATCTCTGCGTGCCTGCTCTCCACGAAAATCATTGTGTCTGCGATAATGGTGTCAGGACCCCTGTTCTGCGGCTGGGTCGGGGGGTCCATGACCTCCATACTGGCCAATGCTGATGCTCCCAGAGTTGCCTTTATGGAGAGGAAGGATGGAATCAAACACTTTCTGGAGGTACAGCCTGTGCCCACTGTATACAATCCCATTATTGCTAAGGGGATCCAATGGGCATGTCCTGCTAGTCCTCTTCAGTGGTGGCTGGAAACTGAGCAGGGTTTAAGTGTGACTGTGAGAGGAAAGATGCTTCCTGTTGTTCCTGTGAGCTGGAGTAAGTGCCCAGCACACTCTGAACATAACACACTGTCCCTGTTTCAGAGAAATGGTCTGACCGGAGACTTCTATGAGAACATTATCCAGTTTCTTGAGTCCAAGTGGAGGCGCATGCATGGAATTGATCAAGACTCACTGTTCCGCTACCTGCCGTCTTCGCTGCGTGGGGATATTTCCACCTTCATGTATGCAGACCTGATCGCAAAGGTAACATGTTCATCAGCTCGTAAACATATCACTCAGCACTGCGCTCCTCTCCACGTCCCTAATGACACGGGCATGAGAGCAGGGTTGGGTCTGCACCATCATTACCCCTATGAGCCATTCAACACGGGATTGCCTTCCGATGCTTTTGGAATCCAGTTCAGATTCCAGAGGAGGGTGAGACATGAGGCTATCGAGTTGTCCGATCAAATGCTCCGGCTGTCAGGGAAACTTGACGGGCCAATCTTCCACAAAATGCTGCGAGCAGAGAGCCTGGAGAAGCTCGAGTACGATGGCGGCATCACTCGCATGCTCTCCAGACAGGTCCGGCACCGCTTCTTCAGAATGGGCAACATCGTGTATAAGAGGGGTGACTGTGAATCGGAGatgtttttcattCAGAAAGGAGAGGTGGAGGTTTTGGCTGGTAATGGAGGGACTGTTTTGTTCACGCTGAAAGTGGGACAGTACTTTGGAGAGGACAGCTTCCTTCACTCAGAGCCCCGTGCAGCAACGATCAGAGCTGCTTCAAATTGCGATCTGTGTGTCTTGACAAAGAAGAGCTTTGAGGAAACTTTTCAATATTACCCAGACATCTACCAGGAGTTCAAGCAGGTTGTAGAGGAAGTAGGAAAGGAAATCCAAAAGACTAAACTAGAGGAAATTGCCGCCAGGTCCCAGCTGCCCTTCAGCAACCAAGACCAAACCTCATCATGCCACCAGAGACCAGGCCTTCTTGAATTGTATGAGCAGTATGCCAGGGCTGAGGCACTGGAGTCCAGCCTGCCACTCTGGGTTCGCCTGGGCCATCGTCTGGGCAGCGCACTCCTAACATGCTGCAGAAACACGTGGCGCTTCATACAGATGATCCGCAGCAAGACCATTGATCCGAAGAACCCCGTCTTGCGCTGGTATCAGTATTTCTCTGCTGTGGTGACTGTCGTGCACTTCTGGTGTGTCACATATATGCCGGCTGTTTACAATGCTGATGTGAATCTCTATCTGTTCGCCAGTGTCGTTGAGTACATCCAGTTCGTGGAGgTTTTAGTCATCATGAATATCTGCTACTATGATGAAGATGGAAATTACGTCTCAAATCGTAAATCTGTGGCGAGACACTTCTTATGGAGGAAACtgggctttttcttttattttgtgagcTCGTTCCCCTATGGTGCCACCGTGTTTCACTTGGCCACCCAAATGCCTGCTGCGAATTACCTGGCTATCTTTGTGTGGGTCCGTGCTGCTCAGCTGGTCCGGATTTTCTCTGTTTTAGTATTTCTAAGACAGGAAGAAAAGGCCATAACTTCAAGCCTCCTGGCAATCCGCCTGCTGAAATATCTTGTGCACTTCCTCCTGCTCAATCACTGCTGCGCTCTCGTGTTTGTGGCGCTGAGCTGCCCAAGCATGTGCATCCCAGGGTCATGGTACCAACAAAAATTCACAGACCTGTACTTGTATTCAGTTTACTGGACTTTAACAACCTACACAAGTACAGGCTTCGGTGATATTGTGGCCATGACAAAGAGTGAGCTCTGGTTCGcaattgttttctgcattttggcCAAGGTACACATTGTGTACAACCTGGGAATGATCTTCTCGACGCTGGCCAACAAGCATGTTCTGCAGGTGGCCAACAAAGagaagctgcagGACATAAAAAGCGTCTTGAGGGATAATAACATCTCCCCCAAGTTACGAGACAAAATTATACACTATTTCAAACACAAGTGGATCTGCACTAGAGGCAGGAACTCAGAGACGATCTTTAGGGACATTCCCCGATATATGAGGGCAGACATATTCGACCGGACCGGTTTAGAAGCTCTTCAGCAGCATGACGTCTTGGCCAAGATGTCAACACCCTTCCTGGAACACCTCTCCACCACAATGCGGCTGCTGAACTTCACTCCAGGGGAATACCTGGCGAGGAGAGGAGACATTGCCACGCAGATGTTTGTGGTGGTGAATGGGACGGTAAAGGTGGTCAGGAACGGACAGGTGGAGTTTCTGTCAACGGGCGCAACCTACGGGGGCAACGAGCTGGTCCTACAGATGAAATACAGAGAGTCGTGGATATCTGATCTATATGTGGAAGTCCTCGCTCTCCTGGAAGACGACTTTTTTGCAGTGGCCTCCCTCTACCGGTATGACATGGACTCCCTCAACATGCAGTCCATTGTCCCGCAGGCAGACAGTCAGCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011304 True 6276 mRNA 0.49 37 17379726 17395987

Neighbor

gene id symbol gene type direction distance location
AMCG00011301 arhgap26,LOC107713172,LOC107661718 coding downstream 36964 17312451 ~ 17342762 (-)
AMCG00011299 kctd16,LOC106603861 coding downstream 176196 17173697 ~ 17203530 (-)
AMCG00011297 kctd16,LOC106603861 coding downstream 220140 17148015 ~ 17159586 (-)
AMCG00011294 NA coding downstream 375222 16978598 ~ 17004504 (-)
AMCG00011291 pou4f3,LOC106603866,LOC106567605 coding downstream 443884 16934506 ~ 16935842 (-)
AMCG00011303 NA coding upstream 38515 17434502 ~ 17452768 (-)
AMCG00011311 NA coding upstream 365923 17761910 ~ 17773165 (-)
AMCG00011315 LOC106604410,LOC107752029,LOC107743918,LOC107602558 coding upstream 388053 17784040 ~ 17785842 (-)
AMCG00011314 LOC107743918,LOC107752029,LOC107664328,LOC107568687,LOC107669111 coding upstream 390933 17786920 ~ 17793506 (-)
AMCG00011318 med7,LOC107744582,LOC107669063,LOC107752091,LOC107664325,LOC107561400 coding upstream 800554 18196541 ~ 18197251 (-)
G105701 NA non-coding downstream 67658 17309790 ~ 17312068 (-)
G105607 NA non-coding downstream 484652 16893960 ~ 16895074 (-)
G105553 NA non-coding downstream 654573 16655247 ~ 16725153 (-)
G105479 NA non-coding downstream 1132425 16244696 ~ 16247301 (-)
G105473 vdac1,LOC106567523,LOC107557296 non-coding downstream 1142041 16236128 ~ 16237685 (-)
G105752 NA non-coding upstream 163415 17559402 ~ 17561795 (-)
G105761 LOC103029292,LOC108441031,LOC106604913,LOC108424167,LOC103354367 non-coding upstream 168182 17564169 ~ 17566963 (-)
G105774 NA non-coding upstream 358340 17754327 ~ 17755758 (-)
G105782 NA non-coding upstream 401456 17797443 ~ 17800287 (-)
G105786 NA non-coding upstream 410692 17806679 ~ 17806929 (-)
AMCG00011290 rbm27,LOC106567487 other downstream 418657 16943932 ~ 16961069 (-)
AMCG00011271 LOC107562913 other downstream 1281547 16043371 ~ 16098179 (-)
AMCG00011259 pcbd2,LOC107386701,LOC105890513,LOC106941140,LOC103129816 other downstream 1405854 15963338 ~ 15973872 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other downstream 1864051 15499534 ~ 15515675 (-)
G105290 LOC108429417 other downstream 2006547 15370402 ~ 15373179 (-)
AMCG00011313 NA other upstream 321639 17717626 ~ 17751099 (-)
G105770 NA other upstream 355266 17751253 ~ 17751502 (-)
G105793 NA other upstream 603681 17999668 ~ 18000445 (-)
AMCG00011316 LOC107664359,LOC107560145,LOC108427843,LOC107752026,LOC105007072,LOC103354679 other upstream 784659 18180646 ~ 18191195 (-)
G105890 NA other upstream 1706306 19102293 ~ 19105269 (-)

Expression


Co-expression Network