AMCG00011317


Basic Information

Item Value
gene id AMCG00011317
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 18271412 ~ 18272204 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011317
ATGGCCCTCTGGTTGCAAGTCATCTCTCTGCTTGCCCTGCTCCTCTGGTCTACTCCACGCTCGACTGATGCTGCTGCCAGTCAACATCTATGTGGCTCTCACCTGGTTGAAGCACTCTTCCTAGTCTGTGGAGAGAGTGGTTTCTTCTACAACCCCAACAAATCCAAGAGAGAGATGGAGCCAGTATTTGGTGCAAAGACTGCTCAGGACAATGAAGTGGATGAATACCCATTTAAGCAACAAGGAGAAATGAAGGTGAAGAGGGGCATCGTGGAACAGTGCTGTCTCAAACCGTGCACCATATACGAGATGGAAAAATACTGCAACTGA

Function

GO:

id name namespace
GO:0006006 glucose metabolic process biological_process
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG:

id description
K04526 INS; insulin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011317 True 330 mRNA 0.49 2 18271412 18272204

Neighbor

gene id symbol gene type direction distance location
AMCG00011318 med7,LOC107744582,LOC107669063,LOC107752091,LOC107664325,LOC107561400 coding downstream 74161 18196541 ~ 18197251 (-)
AMCG00011314 LOC107743918,LOC107752029,LOC107664328,LOC107568687,LOC107669111 coding downstream 477906 17786920 ~ 17793506 (-)
AMCG00011315 LOC106604410,LOC107752029,LOC107743918,LOC107602558 coding downstream 485570 17784040 ~ 17785842 (-)
AMCG00011311 NA coding downstream 498247 17761910 ~ 17773165 (-)
AMCG00011303 NA coding downstream 818644 17434502 ~ 17452768 (-)
AMCG00011330 NA coding upstream 844293 19116497 ~ 19121979 (-)
AMCG00011334 NA coding upstream 928292 19200496 ~ 19208029 (-)
AMCG00011333 NA coding upstream 937618 19209822 ~ 19217839 (-)
AMCG00011332 NA coding upstream 975420 19247624 ~ 19261952 (-)
AMCG00011336 LOC107715168,LOC103027224,LOC108430945,LOC108274535,LOC103354395 coding upstream 1023880 19296084 ~ 19307708 (-)
G105823 NA non-coding downstream 23642 18175668 ~ 18247770 (-)
G105840 NA non-coding downstream 27267 18240676 ~ 18244145 (-)
G105795 NA non-coding downstream 238267 18032755 ~ 18033145 (-)
G105787 NA non-coding downstream 273687 17997438 ~ 17997725 (-)
G105786 NA non-coding downstream 464483 17806679 ~ 17806929 (-)
G105859 LOC105030512,LOC106609167,LOC106569888 non-coding upstream 344645 18616849 ~ 18617084 (-)
G105918 NA non-coding upstream 961518 19233722 ~ 19244483 (-)
G105967 ndst1,LOC106611870,LOC107094997 non-coding upstream 1104309 19376513 ~ 19376908 (-)
G105968 NA non-coding upstream 1124589 19396793 ~ 19480084 (-)
G106023 NA non-coding upstream 1315971 19588175 ~ 19588972 (-)
AMCG00011316 LOC107664359,LOC107560145,LOC108427843,LOC107752026,LOC105007072,LOC103354679 other downstream 80217 18180646 ~ 18191195 (-)
G105793 NA other downstream 270967 17999668 ~ 18000445 (-)
G105770 NA other downstream 519910 17751253 ~ 17751502 (-)
AMCG00011313 NA other downstream 520313 17717626 ~ 17751099 (-)
AMCG00011290 rbm27,LOC106567487 other downstream 1310343 16943932 ~ 16961069 (-)
G105890 NA other upstream 830089 19102293 ~ 19105269 (-)
G105970 rps14,RPS14,rs14,LOC100194652,LOC107685488,LOC107588790 other upstream 1138164 19410368 ~ 19413015 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other upstream 1593410 19865614 ~ 19867902 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other upstream 4270445 22542649 ~ 22554137 (-)
AMCG00011399 NA other upstream 4471226 22743430 ~ 22753616 (-)

Expression


Co-expression Network