AMCG00011334


Basic Information

Item Value
gene id AMCG00011334
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 19200496 ~ 19208029 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011334
ATGGTGCGATCTAAGACTGTGTCCCTTCGGACTATATGCCAAGAGACACTGACTCACACTTCAGCCCACGGTGTCTCCAGTATTTTGCGCTCCACATCCAAGCCTCAGAAGAACTGCTGGATTGtctttgtggtggtggtggtgatttGCATGTTGTGGCAATGCAGTGAGCTCATCAGCACCTTCTTTCACTACCCTTCCCAGGAGAAAGTCACTCTGGTCAACAGCGCGCGGCTGAAGTTTCCAGCTGTGACCTTCTGCAATCTCAACCGTGTCCGCAAGTCCTTCATGCAGTCCAAACTGCGCTTCCTGAAGGAGGAACTGCAGTTTCTCAACGATGACTATGATGGTGCCAACTTGACCCAAAGCCAGGAGGCTTACATACAGGACAGCAACCGTCTGGGTTTCGCATTGTCTAGGCTCAACCTTGAGGAGCAAGCGGAAGCAGGGCATCAACTGGGGGACATGCTCATCTCCTGTCACTTCCACGGGGAGAAATGTGACAAGAGCTTCTTCAATGCTTTCTTGAACCACAAGTTTGGAAACTGTTACACATTCAATAGCCTAACGAAAATGGAGAAGCGTGGAAGACTGATGAGGAGGGATGTTCTGAATGCTACAAAAGCTGGATTTAGCTATGGTCTCACCATGGAGTTGTCTATTGAACAGGATGAATACATAGAGCACATCAGCCAGGCAGCAGGCATCCGTCTCATCATCCACGATCAGAAGGACATGCCGTTCCCTGAAGATGATGGGGTTAACATTTCTCCAGGCCAGGAATCGGATCTTGCCATTATCAAGGCCTGCAAGAAGACATGTGGACAGATGTATATCATTAAGAACTGTGGCTGTGGGATGTGGGAATTCCCTGTTCCAAAGGGCATCAATGTCCCTTTCTGCAACATtactaacaaatacataaGTCTGCCTTTCCTGCTGCAGGATGAATTTGCCAGAAAGCTGAGGAGATCAGGTGGAAAGCTGGCTAAAGTAGCTGACAAAATACGAGATAATCTTATTAAAGTTGTTATTAACTACCAGCAACTCAACTATGAGCTTATTGAAGAGATTCCATCTTTTCAGGTGATTGATCTTCTGTCCAGTGTTGGGGGGCTTGTAGGGCTGTGGATCGGAGTTTCAATCTGCACTGTGGCCGAGTTTCTGGAGCTCTTcttaaaagttattattttttctattacgAAGGTTGTCAGAAAAAGTCAGCATACACCCCTGAATCCCTACATGATCGCTCACCAGACCTATAAGTCAAATGTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011334 True 1281 mRNA 0.47 7 19200496 19208029

Neighbor

gene id symbol gene type direction distance location
AMCG00011330 NA coding downstream 78517 19116497 ~ 19121979 (-)
AMCG00011317 NA coding downstream 928292 18271412 ~ 18272204 (-)
AMCG00011318 med7,LOC107744582,LOC107669063,LOC107752091,LOC107664325,LOC107561400 coding downstream 1003245 18196541 ~ 18197251 (-)
AMCG00011314 LOC107743918,LOC107752029,LOC107664328,LOC107568687,LOC107669111 coding downstream 1406990 17786920 ~ 17793506 (-)
AMCG00011315 LOC106604410,LOC107752029,LOC107743918,LOC107602558 coding downstream 1414654 17784040 ~ 17785842 (-)
AMCG00011333 NA coding upstream 1793 19209822 ~ 19217839 (-)
AMCG00011332 NA coding upstream 39595 19247624 ~ 19261952 (-)
AMCG00011336 LOC107715168,LOC103027224,LOC108430945,LOC108274535,LOC103354395 coding upstream 88055 19296084 ~ 19307708 (-)
AMCG00011335 rbm22,LOC107685490 coding upstream 105798 19313827 ~ 19322039 (-)
AMCG00011345 NA coding upstream 230194 19438223 ~ 19444151 (-)
G105859 LOC105030512,LOC106609167,LOC106569888 non-coding downstream 583412 18616849 ~ 18617084 (-)
G105823 NA non-coding downstream 952726 18175668 ~ 18247770 (-)
G105840 NA non-coding downstream 956351 18240676 ~ 18244145 (-)
G105795 NA non-coding downstream 1167351 18032755 ~ 18033145 (-)
G105787 NA non-coding downstream 1202771 17997438 ~ 17997725 (-)
G105918 NA non-coding upstream 25693 19233722 ~ 19244483 (-)
G105967 ndst1,LOC106611870,LOC107094997 non-coding upstream 168484 19376513 ~ 19376908 (-)
G105968 NA non-coding upstream 188764 19396793 ~ 19480084 (-)
G106023 NA non-coding upstream 380146 19588175 ~ 19588972 (-)
G106163 NA non-coding upstream 733000 19941029 ~ 20014274 (-)
G105890 NA other downstream 95227 19102293 ~ 19105269 (-)
AMCG00011316 LOC107664359,LOC107560145,LOC108427843,LOC107752026,LOC105007072,LOC103354679 other downstream 1009301 18180646 ~ 18191195 (-)
G105793 NA other downstream 1200051 17999668 ~ 18000445 (-)
G105770 NA other downstream 1448994 17751253 ~ 17751502 (-)
AMCG00011313 NA other downstream 1449397 17717626 ~ 17751099 (-)
G105970 rps14,RPS14,rs14,LOC100194652,LOC107685488,LOC107588790 other upstream 202339 19410368 ~ 19413015 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other upstream 657585 19865614 ~ 19867902 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other upstream 3334620 22542649 ~ 22554137 (-)
AMCG00011399 NA other upstream 3535401 22743430 ~ 22753616 (-)
AMCG00011409 NA other upstream 3845284 23053313 ~ 23060966 (-)

Expression


Co-expression Network