AMCG00011344 (LOC101481134)


Basic Information

Item Value
gene id AMCG00011344
gene name LOC101481134
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 19286626 ~ 19289195 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011344
GGTCTATTTTCAGTCATTCAGAAGCTGAAAGGGTCCACTGAGCAGGAGTTGAGGATAGTTCTATTGGGGTTGGACAATGCCGGAAAAACGACATTACTGAAGAAACTTGCTTCAGAAGATGTGAGCACCATCACTCCGACACAGGGCTTCAACATTAAAAGTGTGGCTTCTAACGGTATGAAACTGAATGTGTGGGATATTGGAGGACAGAGGAAGATTCGCTCTTTTTGGAagaaatatttagaaaatacagaCTTGCTGGAGCTTTCTGAACTCATAGAAGAGGAGAACCTAAAAGGCGTCCCTGTGCTCATCTTTGCTAACAAGCAAGACTTGGTGACAGCAGCTCCAGCGAGCGAAATCGCAGAGGGGCTGAACCTGCACACGTACCGAGACCGAGAGTGGCAAATCCAGGCCTGCTCAGCACTGTCGGGCGAAGGAGTGCAG

Function

NR:

description
ADP-ribosylation factor-like protein 3

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011344 True 447 mRNA 0.48 3 19286626 19289195

Neighbor

gene id symbol gene type direction distance location
AMCG00011343 NA coding upstream 7370 19268970 ~ 19279256 (+)
AMCG00011331 LOC103390990,LOC105893714,LOC101160174,LOC104927068,LOC102798575 coding upstream 134897 19150482 ~ 19151729 (+)
AMCG00011329 LOC108431127,LOC107658040,LOC107707213 coding upstream 196192 19054134 ~ 19090434 (+)
AMCG00011327 si:dkey-34l15.2,LOC107707213 coding upstream 244425 19017222 ~ 19042201 (+)
AMCG00011326 si:dkey-34l15.2,tenm2,LOC107670182,LOC107707213,LOC101076136 coding upstream 286742 18947352 ~ 18999884 (+)
AMCG00011338 NA coding downstream 22112 19311307 ~ 19313365 (+)
AMCG00011340 ndst1,LOC108278613,LOC108431357 coding downstream 83252 19372447 ~ 19396764 (+)
AMCG00011337 rps14,RPS14,LOC100194652 coding downstream 121416 19410611 ~ 19414281 (+)
AMCG00011341 NA coding downstream 133264 19422459 ~ 19427557 (+)
AMCG00011342 NA coding downstream 145133 19434328 ~ 19438204 (+)
G105858 LOC105030512,LOC106609167,LOC106569888 non-coding upstream 669561 18616850 ~ 18617065 (+)
G105811 NA non-coding upstream 1038858 18175355 ~ 18247768 (+)
G105794 NA non-coding upstream 1253601 18032755 ~ 18033025 (+)
G105792 NA non-coding upstream 1286283 17999636 ~ 18000343 (+)
G105776 phykpl,LOC100691570 non-coding upstream 1518405 17765891 ~ 17768221 (+)
G106022 NA non-coding downstream 298998 19588193 ~ 19588973 (+)
G106071 NA non-coding downstream 513976 19803171 ~ 19803475 (+)
G106134 NA non-coding downstream 667810 19957005 ~ 19995987 (+)
G106138 NA non-coding downstream 689052 19978247 ~ 20014348 (+)
G106277 NA non-coding downstream 1326243 20615438 ~ 20615641 (+)
G105916 NA other upstream 64205 19222055 ~ 19222421 (+)
AMCG00011328 NA other upstream 169257 19107273 ~ 19117369 (+)
G105778 LOC105024433,LOC107752029,LOC107743918,LOC106604409 other upstream 1498576 17784163 ~ 17788050 (+)
AMCG00011293 plac8l1 other upstream 2304385 16978492 ~ 16982241 (+)
AMCG00011268 NA other upstream 3176245 16105586 ~ 16110381 (+)
G106139 LOC108275110 other downstream 806034 20095229 ~ 20162966 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other downstream 1006816 20296011 ~ 20339325 (+)
G106242 NA other downstream 1072013 20361208 ~ 20367223 (+)
G106613 NA other downstream 4052113 23341308 ~ 23341765 (+)
G106618 NA other downstream 4066867 23356062 ~ 23356559 (+)

Expression


Co-expression Network