AMCG00011352


Basic Information

Item Value
gene id AMCG00011352
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 19619982 ~ 19629426 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011352
GTGCTGGTGTTGGGATGATTGTCATCGTTTCGTTGGTGGCCATTTACTACAACATGATCATCTCCTATGTGCTCTTCTACCTGTTTGCCTCCCTGACCAGTGACTTGCCGTGGCAGCACTGTGGGAACTGGTGGAACACAGACCGCTGCCTGGACCATAGGCTCGTCAGAGGACACAACGGCTCGGCGGGACAGTCTGGCCTCTCTCGCAATATGACCGGCACCGTCAGTCCCAGTGAGGAGTACTGGAGGTATGGCTATTGTAGATTAAGAATCCCAGTTCCCATAAAACAAgGTTTTGGTGGTTTGCTGACCTTCGCTTCCTACAACACCTTCCACCAAAACATTTACAGGGACACATTCATAGTGACTTTGGGAAATGCCTTCACAAGTATCCTGGCAGGCTTTGCCATCTTCTCAGTGTTGGGGTACATGTCTCAGGAGCTAGGTGTGCCTGTGGACCAAGTGGCTCAAGCAGGTCCGGGCCTAGCCTTTGTTGTCTACCCGCAGGCCATGACAATGCTTCCACTTTCTCCATTCTGgtccttccttttcttcttcatgCTATTGACTCTAGGTCTGGACAGCCAGTTTGCTTTTATGGAAACAATTGTGACTGCTATCACAGACGAGTTTCCCTTCTACTTAAGACCAAAGAAAGCCTTATTCTCAGCTTGTGTTTCTATAGCAATGTTCCTGATGGGCTTGATTCTCACCACAGAAGGAGGAATGTACTGGTTGGTGTTATTTGATGACTACAGCGCAGGGTCTGGACTAATGGTTGTGGTGATAACTTCATGCTTTGTCATTTCACGTGTCTACAGTGTAAAAAGATTTTCTCAGGACATTAAGATGATGCTCGGCTTTGAAccagggttttattttaagacctgCTGGAATTACCTTTCTCCACTCTCTATGGTGGCCTTGCTCATATACAGCATTGTGAAGTATGAACCGTCTGAGTATGGCACCTACAAATTCCCTCGGTGGGCCGAGGTCCTGGGCATCCTTATGGGTCTGCTGCCCTGTCTGATGGTGCCAGCCGGGATGCTGTTTGCTCTTTTCCGGGAAGAAGGAACATTGACAGAGAGATTTAGGCAAGCCATCCGGCCATCCTTAGACTGGGGACCGGCCCTAGAGGAAAATCAGACGGGCATCTATGTGAACAAGCTCCAAGGATGCCAATCTCCAAGACCCTTGATGGTCCACATGAGAAAGTACGGGGGAATCACAAGCTACGAGAACACGGCAATGGAAGTGGACAGAGAGATTGACATGGAGGAGGAATCCATC

Function

GO: NA

KEGG:

id description
K05040 SLC6A7, PROT; solute carrier family 6 (neurotransmitter transporter, L-proline) member 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011352 True 1295 mRNA 0.49 9 19619982 19629426

Neighbor

gene id symbol gene type direction distance location
AMCG00011351 NA coding upstream 10957 19601365 ~ 19609025 (+)
AMCG00011347 NA coding upstream 120777 19485659 ~ 19499205 (+)
AMCG00011346 NA coding upstream 135836 19480738 ~ 19484146 (+)
AMCG00011339 LOC107748112,LOC107588766,LOC107590070 coding upstream 144106 19451015 ~ 19475876 (+)
AMCG00011342 NA coding upstream 181778 19434328 ~ 19438204 (+)
AMCG00011353 ik,LOC107692978,LOC107661680 coding downstream 212747 19842173 ~ 19887630 (+)
AMCG00011358 LOC106603042,LOC107757604 coding downstream 259902 19889328 ~ 19898258 (+)
AMCG00011360 hars,LOC106611772 coding downstream 272735 19902161 ~ 19909593 (+)
AMCG00011359 NA coding downstream 285186 19914612 ~ 19919189 (+)
AMCG00011361 NA coding downstream 325194 19954620 ~ 19955087 (+)
G106022 NA non-coding upstream 31009 19588193 ~ 19588973 (+)
G105858 LOC105030512,LOC106609167,LOC106569888 non-coding upstream 1002917 18616850 ~ 18617065 (+)
G105811 NA non-coding upstream 1372214 18175355 ~ 18247768 (+)
G105794 NA non-coding upstream 1586957 18032755 ~ 18033025 (+)
G105792 NA non-coding upstream 1619639 17999636 ~ 18000343 (+)
G106071 NA non-coding downstream 173745 19803171 ~ 19803475 (+)
G106134 NA non-coding downstream 327579 19957005 ~ 19995987 (+)
G106138 NA non-coding downstream 348821 19978247 ~ 20014348 (+)
G106277 NA non-coding downstream 986012 20615438 ~ 20615641 (+)
G106298 NA non-coding downstream 1278024 20907450 ~ 20907653 (+)
G105916 NA other upstream 397561 19222055 ~ 19222421 (+)
AMCG00011328 NA other upstream 502613 19107273 ~ 19117369 (+)
G105778 LOC105024433,LOC107752029,LOC107743918,LOC106604409 other upstream 1831932 17784163 ~ 17788050 (+)
AMCG00011293 plac8l1 other upstream 2637741 16978492 ~ 16982241 (+)
AMCG00011268 NA other upstream 3509601 16105586 ~ 16110381 (+)
G106139 LOC108275110 other downstream 465803 20095229 ~ 20162966 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other downstream 666585 20296011 ~ 20339325 (+)
G106242 NA other downstream 731782 20361208 ~ 20367223 (+)
G106613 NA other downstream 3711882 23341308 ~ 23341765 (+)
G106618 NA other downstream 3726636 23356062 ~ 23356559 (+)

Expression


Co-expression Network