AMCG00011364


Basic Information

Item Value
gene id AMCG00011364
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 19987249 ~ 19995970 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011364
CTTGGTTATCGGATTGGGATCAGTCTCGTTTCTCTTCTTGATCACTATATTAGTTATTATCGTGCTGAAGTGTCAGAAACTACATCAAAAGCAACCGGCTCCGTCCTGTAGGAACAGTTTCGTGAGCCAGAGGAACTCTATGAACTCTCAGATAGCGGATTCCACCTTGATTTCCAGCGATGCCTACTGGTACAGTTTGTTTCTGGCAGAGTCTCGGAAAGGAAACATTCTTGTCAGACAACCGGTACCGGATGGGTCAGGATACATCGTGTCCAGCATACCGAGGAGTACAGGGATGACAGAGACAAGTACTTCAGCCAATTCAACACTGCAGAGGCAGGCAGCTGTAGCTTATGTCCCCAGCCAGTCAGGCCAAACCCAGGCCTGGAGTCCACTAGTGGTTTCCCATGAGGCTTTCCTGGTGGAATTTCGTCAGGATGAATCCATCAGACACAGAGAAAAACCTCCCGAAACACCAGACCTCAGGATAGCGATGACGTGACCTGATTCCTCTCAGCCCCGATCACCTTCCCTGCGTTCTCCTGACTGACACGACCGACATACCATCCAGCATGACTCTGCATGGCTATAGAAACAGAATGacagaatttaaaaagaagaaaagaagggaACAAAAAGAACATTTCTGCCATTTCTCAAAAAACCCcaataaaagcaggaaaaaatgagagagacagacaataacaaaaaggaaatgacCTCCACGCTGTCTTTGAAGGATATCAGCTTTTCAAAATCCCAGACAATCTCTTCTACTGAGgaatttggaaaaacaaaggGACACAAAATAATGCCTTTTACTATAGTCTGGTAGGCCCTTCCTTGATGGGTACTGTCTTAAGGGCAAGTGTAGCATGTATTATTGAGAAGCCATTTTATAGCTCAATTAAgggaactttattttatttatgattccACTGAATACTTCTAATCAACTACAgagttattttcaaaatgcttgAAGTCATGAGGCATTTAagaaatagtattattattattgctacttAAGACCTGCTTTAGTTAGTTTCATTTCCATCTAATCTCAGAAGAAACAAACCTACAATGTTTAAGGAGCAGATGGCTGGCTTTCATAAGTCAAAAGCAAGCCAgcatctgaatacattttccttaaatAGCTCATGACTGAAAGATTTATGAATTAGACCCGATTTCAGTAAGACTGCTTATTTGACATCTTGTGTTATATTTAGTAATGAGGATAAGATTTGCTCACGATTTCTTTAAAGCTGTCAAGACATTTATGTGCAACgctgcaaacaaaaaatatggtTGGTTGATTATGGTGGCTAACTTTTATTACTAAATACAATACCTCAAGCTGAATTACGCTAAACCTTTCCAAGGCAATTGTCCTCTTTAGTTTCTTAcactgtgattaaaaaaaaagatgaattgTGTCAGTTTTTAGAAAATTAGCCACTTGAATGGACCTTTTTACCTACCATCCAAGTAGACTTTATCCTCTCTAAAACATAAAGTTGTTTAGAAAAAAGACTGTTTTGAATTCAGATTACATATTGTGAGTCGTAGATTACAGTATTTGTTGTGTTGAATTAATTTGTGTGATTCAGTAGACTACATTaatagaataaacaaaacaacataaatatagTGTTGGAATTGTGCAATTAAACACTCGCCaggttttaatgtttacatttattttatatgatgtatgattggggaaaaaaaatgagatgttgattttatacattttaatgctgcTTTGTGTGTGATCTAATATCCAAGTGCTTTCTGTAAAGTATTATATCAGTGGTGCAATACATAGTCATTAAGCtttttacatactgtatattacataAACGTATCACAATAATAGTGGTGTATACCACAGCTTTACATGTTACCAAAATAGTAGAGATTGTAGTAGTTGTAGAGTAGAGTTAGTGAGCTATTCTCAAGTGGGCCCataacatatatttgtattatttaagcCTGAAGGAGATGTCCCCCCAGTACAGAAGTTGAATTCATTGCTAAATAATATTCTATGCAGAACTGTTATATAGGAAGAATACTAGATTTCCCTGTCAAACGtgttgtgaaaaaataagagggaactataaaactataaaaactgctttttattttaggaaacgCAGAGGTATAAACCAATGAGATATGCATGTGTTCCACTGTCAGGATCTGAATAGATACTGgccagtttatttttctttggtgacctttgacctcaTCAGTGGGAGGCACTGCACAATGTAGACGATGTTATGCTTTGTCAGTTAGTTAATCTGTGTGACTGCAGGTTTGACTGAAAGCCTTAATATGTCAGCTGTAATAGGTGCTCTTGAATTCAGGATTCATCTATCAGGCCTTTGGAGGGATAAAAGggaacattttctcttttattttcatattgttgGAGTCTGTTTGGGTTTGTTTATCGAGAAAGATGAACACATACTGTATCAGAACTGTGATACATCATTGTGTGACTGATTTGTCTCGTTATTGTTATTCTATGACTCCAGAGTCATGCATGCAGtgaaatatcatttaaaatctgaTGAATTTTCTTAAAGGggttctttaatttaaatgacttGATAACAGAATGTTACATGTGGGTTTAATAGTTACATAACCAGCCCCCAAACTATGTTTTTAACTCAGAACAATTTTAGATACCTTCAACTGATTGGCACCTTTAAATGGCCTACATAATCAGTGTTGTGGGGAATATATTGCTTACATGATTTGCTTGCTAGTAGTGGTCTGTTTTCACTGTCttgctttattacatttaacAGACATATACAACCCCCCTCTTCCCATAGGCGTAAAATGATTCACCCTGATGTAATTTGCTAGGTCCCAGAGTTTTTATGTACTTTGAAAAATACACAGTTTGATGTTAGATCAAGTGTTAtgaatttcttaattttttgaatgcttttaattgaaaacatgtttttttgggtGCTCTCTTTCTTTTATACAAAATTCTGTTGCCAAGTTAAGGCTTTAGCACTCATTTTTGAATAGTGTGTGTGCTACAGTACAATATCATAACCCGAGGTTCATTTGAGATTGTGTCTTATTCAGTGCACTGTTAAAACATAGCTTTGAGACATTCCAGACACTGCAAATAGCATCTGGGCCTTCTGTTCCTTCTGTTAGTATGAGAACAAATGTATGTGTTGGAAATGTATTGTTCTATATGTGGTGTGTTTTTCaaacaacattttcagattttaagtTAGTGGCTGATCTAACTAGTTTTAACTCATAGCTTATTTAAAATCATCATCCACCAAAACatagtattatatttattaataaacaaacaacaacaataaaataaacatttgaggGTTCTTCTATAAAGTCTTTAACatagattatacatttttggtcTTTCAACTTTGGACATAACAGATATCTCTATATAGCTAATGAGTTAAAACTCTGTGGTCAGGATATCTTTTGTATGTAGTATAATAAGCAGAATTGTGTAGTAACATAAAGTATTAAGTGCTGTTATTACAAACAATGTGTGCAGATTGACAGTTCAGAAACATTTCCAGCAGTTTTCTGTACTggcatgattttgtttttcctcacaaGAATTTTAAGCAAAATTAcctatgttttttctttattctattTTACTTTGACCTGTCTAATTACTGCATTTAGCtttctataaaacaaattatttatttaatgaattatgtAAGACTTTTTTATTACCCAAAAGTATATTTTACACCACATCTTTACCCAAAAGATACTGCTTTTCGGGTAAACCTATGGTGAATTGTGTGCCATGGAGCAAAAGAAACCTTTGCTGTTAACGTTGTGTTGTCTCAGTGATGAAATATAGGTATTGGGTGATTGCCTGTTATATGCTGCTACTCACTTTGCATggcatcattttattttggttctgCAGGAGGCTGTCACTCATCTCCTCAGACTATTCAAAGTTGTATGCTAGTGGAACAAAGAACAAGAGTGTGGGCATGAATTGCTTTCTGGTCATGTGTGCTGATGTTTTGCTTGTAAATACTAAAGTGTCAA

Function

GO:

id name namespace
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds molecular_function
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011364 True 4104 mRNA 0.36 3 19987249 19995970

Neighbor

gene id symbol gene type direction distance location
AMCG00011363 NA coding upstream 29615 19956472 ~ 19957634 (+)
AMCG00011361 NA coding upstream 32162 19954620 ~ 19955087 (+)
AMCG00011359 NA coding upstream 68060 19914612 ~ 19919189 (+)
AMCG00011360 hars,LOC106611772 coding upstream 77656 19902161 ~ 19909593 (+)
AMCG00011358 LOC106603042,LOC107757604 coding upstream 88991 19889328 ~ 19898258 (+)
AMCG00011373 NA coding downstream 742412 20738382 ~ 20739024 (+)
AMCG00011374 NA coding downstream 958824 20954794 ~ 20958447 (+)
AMCG00011380 NA coding downstream 1131140 21127110 ~ 21131535 (+)
AMCG00011381 NA coding downstream 1231240 21227210 ~ 21236755 (+)
AMCG00011387 NA coding downstream 1323454 21319424 ~ 21385863 (+)
G106071 NA non-coding upstream 183774 19803171 ~ 19803475 (+)
G106022 NA non-coding upstream 398276 19588193 ~ 19588973 (+)
G105858 LOC105030512,LOC106609167,LOC106569888 non-coding upstream 1370184 18616850 ~ 18617065 (+)
G105811 NA non-coding upstream 1739481 18175355 ~ 18247768 (+)
G105794 NA non-coding upstream 1954224 18032755 ~ 18033025 (+)
G106277 NA non-coding downstream 619468 20615438 ~ 20615641 (+)
G106298 NA non-coding downstream 911480 20907450 ~ 20907653 (+)
G106310 NA non-coding downstream 956252 20952222 ~ 20952712 (+)
G106327 NA non-coding downstream 1024240 21020210 ~ 21022119 (+)
G106347 NA non-coding downstream 1032823 21028793 ~ 21033188 (+)
G105916 NA other upstream 764828 19222055 ~ 19222421 (+)
AMCG00011328 NA other upstream 869880 19107273 ~ 19117369 (+)
G105778 LOC105024433,LOC107752029,LOC107743918,LOC106604409 other upstream 2199199 17784163 ~ 17788050 (+)
AMCG00011293 plac8l1 other upstream 3005008 16978492 ~ 16982241 (+)
AMCG00011268 NA other upstream 3876868 16105586 ~ 16110381 (+)
G106139 LOC108275110 other downstream 99259 20095229 ~ 20162966 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other downstream 300041 20296011 ~ 20339325 (+)
G106242 NA other downstream 365238 20361208 ~ 20367223 (+)
G106613 NA other downstream 3345338 23341308 ~ 23341765 (+)
G106618 NA other downstream 3360092 23356062 ~ 23356559 (+)

Expression


Co-expression Network