AMCG00011372


Basic Information

Item Value
gene id AMCG00011372
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 20713938 ~ 20728141 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011372
CTGGACGCGACGAAAGACCCCTGTCTGAAGGTGAAATGTCCTCCGCGCAAGGTGTGTGTTACTCATGACTACCAGACAGCCATCTGTATCAACCATAAACAGCTTGTGCACAGtgtacccAGGAGAGGCAGCATGAACCATAAGCACTGGATGGGAACCGCAAACTTCGCCAAGTGTAAATCTTGTCCTGTGACCCATCCCAGCCCTGTCTGTGGCTCAGACGGACACACGTACTCCTCTAAGtta

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011372 True 246 mRNA 0.52 3 20713938 20728141

Neighbor

gene id symbol gene type direction distance location
AMCG00011371 spock1,LOC106604788,LOC106611816 coding downstream 53331 20645503 ~ 20660607 (-)
AMCG00011370 trpc7,trpc7b,LOC107596405,LOC107654649,LOC108274464,LOC105903241,LOC103471336 coding downstream 169187 20499122 ~ 20544751 (-)
AMCG00011368 NA coding downstream 236857 20440474 ~ 20477081 (-)
AMCG00011369 NA coding downstream 275019 20434458 ~ 20438919 (-)
AMCG00011367 NA coding downstream 323193 20386164 ~ 20390745 (-)
AMCG00011375 NA coding upstream 164449 20892590 ~ 20907111 (-)
AMCG00011376 NA coding upstream 230723 20958864 ~ 20966129 (-)
AMCG00011379 NA coding upstream 248542 20976683 ~ 20977159 (-)
AMCG00011378 NA coding upstream 253268 20981409 ~ 20989043 (-)
AMCG00011377 NA coding upstream 266311 20994452 ~ 21007340 (-)
G106278 NA non-coding downstream 98296 20615438 ~ 20615642 (-)
G106266 NA non-coding downstream 225750 20486271 ~ 20488188 (-)
G106224 NA non-coding downstream 437633 20272063 ~ 20276305 (-)
G106212 NA non-coding downstream 496462 20217251 ~ 20217476 (-)
G106183 NA non-coding downstream 598070 20071482 ~ 20115868 (-)
G106300 NA non-coding upstream 183778 20911919 ~ 20912138 (-)
G106340 NA non-coding upstream 223619 20951760 ~ 20952855 (-)
G106448 LOC106604502,LOC105008787 non-coding upstream 1067484 21795625 ~ 21799926 (-)
G106453 LOC103471465,LOC102309231,LOC102203450,LOC107738605 non-coding upstream 1146671 21874812 ~ 21875126 (-)
G106454 NA non-coding upstream 1198712 21926853 ~ 21928367 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other downstream 846036 19865614 ~ 19867902 (-)
G105970 rps14,RPS14,rs14,LOC100194652,LOC107685488,LOC107588790 other downstream 1300923 19410368 ~ 19413015 (-)
G105890 NA other downstream 1608669 19102293 ~ 19105269 (-)
AMCG00011316 LOC107664359,LOC107560145,LOC108427843,LOC107752026,LOC105007072,LOC103354679 other downstream 2522743 18180646 ~ 18191195 (-)
G105793 NA other downstream 2713493 17999668 ~ 18000445 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other upstream 1814508 22542649 ~ 22554137 (-)
AMCG00011399 NA other upstream 2015289 22743430 ~ 22753616 (-)
AMCG00011409 NA other upstream 2325172 23053313 ~ 23060966 (-)
AMCG00011414 NA other upstream 2664963 23393104 ~ 23489642 (-)
AMCG00011428 NA other upstream 3085716 23813857 ~ 23817543 (-)

Expression


Co-expression Network