AMCG00011375


Basic Information

Item Value
gene id AMCG00011375
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 20892590 ~ 20907111 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011375
CGGGGCTGGAGCTGCAGTGAGAGTTCCTGTGCGATGAGAGTGATGGATCCTGCGGCTCATTCATCTGCCCTTTCTGCTCTGTCTGGACACACTGTGCTACACTTGTAATGGCTACTGTGGAGGAGAGTCAAGAGCTGGAGTCTGGCTCCAACCAACCAGCCATTGAGGACGAGCAGACAGAGTTGGCATTGACTTCCAGCAGGGAGGAAGAGGCCCACAGCGTCCAGGAGGAGGATGGGAGACCAGCCCTCGCTGACCCTGAGTGGATAGAAGAGAGATTCAGGATTGACAGGAAGAAACTGGAAACTATGTTGCACTCCCCAGACAATGAAAATAGTACAACCGGTGAAGAATTCTTTCAAAAGGTGATGATGGAGACAAATACACAGATTAAATGGCCTTCCAAGCTGAAGATCGGGGCGAAATCAAAGAAAGATCCACATGTGAAGGTGGAAGGGAAGAGAAACAATGTCCTGGAGGCCAAGAAGAAGATATTAGATATTTTGGAAACAAAGGTGAATAAAGTGACTCTAAAGATGGATGTGGCCTACACCGAGCATTCCCATGTGATCGGGAAAGGAGGCGGCAATATTAAAAAGGTCATGGAGGAGACCCTCTGCCACATCCACTTCCCCGACTCCAACCGCAACAGTGTCAACGTGGAGAAGAGCAACCAGGTGTCAATAGCTGGGCCTGTGTGTGGTGTGGAATCTGCCCGGAGAAAAATAAGGGAATTACAGCCTCTGGTTCTGAGCTTTGACCTGCCTGTGGGGATTGTCCCACAGACTTTACCCGACCTCAACTCGCCACTCATTCAACAAGTAGCCCAGACCTTTAATGTCACCGTCACCTTCCAACAGCAACCGAAGATCTACACCACAACCTGCACAGTAAGGGGCCTGCAGGGCAGCTGCGCCTCTGTCAAGAAAGCCATGTCTGTGCTTGTTGAGATACTGGTTGGTGTGGAGACTAGTGTCACTGTGAGCACACAGCTCAACATTAGCTCCCAGCAGCACCTCTTTCTCATCGGCCAGAATGGAGCCAACTTCATCAACATAATGCAGGCGACCCAGACTCAAATCGTGCTGCCAGACTTAAACTCCCCACAGAGCCGCGCCACCCTACTGATACAGGGCACCACCGACGCTGTGTGTCTGGCCAAACAGCAGCTACTGGAttgtctgcctgtctgcttGATGTTTGACATGAAGGAGGATGGCGTGGAAGTGGAGCCACGCAAGCTCAGCCAGATGATGCACAACCTTGGGGTCTTCATCAGTGTCAAGCCCAGAGTGAAGCAGACGGCCAAGTCTGTAGTAGTGAAGACCTTGGAAAGGAATGCGGCTAACTTGTATGAAACCAGAAGATTGCTTTTGGGCCTAGAAACCAGCGAGGTCCCCACGACAGTAAAGCCGACCCCTGATGTTCCCTTGACAAATAGCCTTACGAATTACTGGCTCAATCTGATCGCACAACAGCTCGGCCTCTTTGACGCAGGAGCGGTTGTGACTCCTGAAGCAGTAGTCAGTGCTCTGTTACAGGTGAAATCCAGGCCTTCACCTCCTCCAGGTCTCGGCCTTCAGCACGAAGAGAGCAGGGGAGCCCTGAAGGGAAACGAGAACAAATTGTGGGAAAAAATTTCAGGAACCGAACTTCGACAGAGCTCTTCTGGGAGTGAAAAGCCCAGAACGGAGAGTTCAGAACCCGAGGAACAAGCAGACGGTCTGACCTGGAGAAGCAGCCAGTTGGAAATCCACAAAGACCATAACCAAGGCGAAGGTGAATCGGCCACTTGCCAGGCAGCTGGAGTGCAGAAATTCATCCAGTCgttGTTTAAAGGTGATGCGGACAGTGACAATGCAGAGATAATAAGCAATCTGAAAACAGACAACTTGCAGAATCTGAATGAGgattatgattatgaaaagAAGAAACTTTTAGCGACAAGGGcCATGCAGAAGAAGCCGGTGGTGACGGAGGTGCGGACACCCACAGACACCTGGAGTGGCCTGGGCTTCTCCAAGTCCATGCCTGCCGAGGCAGTGAAGGAGCTGCGTGCTGTCAGTCGACGAAACTACAAGTCGTAcctcagcaacaacaacagccagACATGGGCTTTGCACCAATCCCTAAGTAAAGACAAGGTGGCCAGTGGGAGCAACTCTGAAAACTGGCGGGAACGGAGGGAATCTGCACCTTCATTCCAACCGGTCACCTCCAACTCCATgacctcttcctcctcctcctcctccttccccacCTTTGCGGGTCTCACAATGAGGAGTCGAGCAGACAAATCTACGGAGTCCCTTCTGAGCTGCAGTAATTACTTTGAGAGTGTCTCCTCTCTGAGCCGGCCGGGCAGCCTGGCCACCAGCCTGTCTCCTCCGCACTCAGCAGACCTGCCGGAGCTGTTCAGTCAGCTGGGCCTGGGGAAATACATCGACGTCTTCCAACAGCAAGAGATAGACTTTCAAACGTTTCTGACACTATCCGATGAGGACCTTAAAGAAGTGGGAATTTCCACTTTTGGGGCAAGGAGGAAAATGCTCCTAGCTATTTCAGaacttactaaaactaaaaagaagTTACTGGACCCCCCCACAGTGAAGTCGGGATATCTCGAAGGCGGGGCAAGTGGTCGCCTGCCACGCATCGTAGACATTGACGTGGCAGGACAGAGTAACTGCTGGTGAAGAGGAGTGGAGTGACTTCCATGACTTGAATAACCAGTTGTTCTGGAACAAAGACAACAAGCCACAGTCAACAAGTAAACAAGCTCTCACTGATGATAACTGGAGGTGCAGCCAGAATAGCACCCCCTCTCTGTTTGCACGGTCAGTGCCTCTCCTCAGACTGACCTGTGTGGGCTTTGGTTGTTGCCTGAACTGCTCAATGGGTACAATAGTCATGCTGTTATGCAGGAGCACATGTATTGAGAGGCTGTCGGAGGTGGTATATCTTGGATGCTGCTGCACATAATGTTGTGAAATTTACCAAACAGCATGGATGCGGCATTGGAAATAACTCTGGAAATAAAGAGCACCATCTGGCATGATTGCTCTCTGTCCTACACTGCTGTCAGTGtggaagaaaaatgttttctccTGCTGGGGAGACCAAATCAGAACTGACCCTAGCAAGTTACTATGCTCGCTACATTCATGATGCTGACTACATTCCCTGAGGTTTTATGTATCCATTGCCAAGATTTACCACCTCAAACTATGTGAAATTTGTACAGGAGGAAATTGAGTCTGCGTTAGCTTCTCTGACCatgttgttcttattttctgtCAGTCGAAAACCGTCTCCAGTATCTTATCTTGTCTGATCACTTCATCTGAAACTCCACAAGAGACCTTCAGTGTAGACGATCAATGTGATCTAATAAGACTTAAGGAGTTTACTACTGATGTCATTTGGTCTTTGAGCGCCAGTCGACATAGTGCAGTCACACAGCTCTGACACTTATCAGAACTGTCCACCGCGAGAAACTATTCAGTGATTTTCTGTCATTTGCAAACTATCTGATCACATCAAACTTAAAGGTTACTCTCAAACAGAGGTCTCCATTACTGAATAGCCATGTAGCCAtcagttcacattttcaaagaatATTTGTTATCATATTATAGCATCCAATCCCCAGTGTAGATGTGTGATTGTGGTGATAAAGTTTTCCTAAAATGctgctgtttgtatttttttttaagaataaagaCTAACAGAAGTTTGGGTGGAATTAGGCGAtatcttatttatttgcaattcCAATTATTAGACTTTAAAATAACCAACAATTAAATCCATTTGAATATCTATATGAAACAAAGTTAATGAGAGTCTAGATGTATTGGCAATGGTCTTCCAAGATGTTTTGCCAATTTGATTTGGAACTATTAAGATCTGGGAAACTTCAGCTCTGTAATAAGAGAGTGTATGGTATGTCAACTGTAAAGCAAGGCTGGGTAGGGTTAGAATACAATTAACCCCAAGGGTAAGGGATAGAATTGCAGAGTACAACATTAGACATGAGCTCATTTTCTGTCAAAGATCTCTCGAAGGAAGAAAGTGAAAAATTATTGTAAGTACCCAGTAATGCTTCTGTGTTCTCTTTACATTAAGCAATTCATCAAATGAAAGGATTAGGCCAATTATGCAGAATTCATGCCAATGAAAAATGATTCCTGTTTCCAAGGTTCATCAAGATGTAGCAACATCAAACCACATGCACCCAGTATTACCATTTACCCAAActgtattgcttttaaaatagtcattaatattagttttttgaATGATCCAAGCAATATAAGAAAACTGGTATACACCTTTTATTCCACCCCTATACTTTCATCATGAAAGGGTACAGGCATTGTAGTGCTATGGTAAAAACTTGGCAGCTATAATAATGTTTGAtctgttatataaaatatttaaataaactgttgaGTCTATCCAAAAGGCGTCTGTCTTTGTAGTGAGCATTAATAACATTAGTAGAACTAATGGATTTTGTAGGAGTTATGATAATTCtataggggaaaaaacattttacttttttataagATCACATTTTATCTGAAAAATTGCCCATGGgagttttgaatgatttataagtATGAAACTGTTCCCATCTCTGAACTTGTAGTAAAGAACTTGGCATATGTATACattctgatttctgatttcctttttcgaaaatcatattttgccactagagggcagcTCTGTCatctctgtgttgttgtttttaatgtttattttttattttttatttttttttgggggggggggggttaatgag

Function

GO: NA

KEGG:

id description
K18756 BICC1, BICC; protein bicaudal C

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011375 True 4810 mRNA 0.45 19 20892590 20907111

Neighbor

gene id symbol gene type direction distance location
AMCG00011372 NA coding downstream 164449 20713938 ~ 20728141 (-)
AMCG00011371 spock1,LOC106604788,LOC106611816 coding downstream 231983 20645503 ~ 20660607 (-)
AMCG00011370 trpc7,trpc7b,LOC107596405,LOC107654649,LOC108274464,LOC105903241,LOC103471336 coding downstream 347839 20499122 ~ 20544751 (-)
AMCG00011368 NA coding downstream 415509 20440474 ~ 20477081 (-)
AMCG00011369 NA coding downstream 453671 20434458 ~ 20438919 (-)
AMCG00011376 NA coding upstream 51753 20958864 ~ 20966129 (-)
AMCG00011379 NA coding upstream 69572 20976683 ~ 20977159 (-)
AMCG00011378 NA coding upstream 74298 20981409 ~ 20989043 (-)
AMCG00011377 NA coding upstream 87341 20994452 ~ 21007340 (-)
AMCG00011384 NA coding upstream 104760 21011871 ~ 21021937 (-)
G106278 NA non-coding downstream 276948 20615438 ~ 20615642 (-)
G106266 NA non-coding downstream 404402 20486271 ~ 20488188 (-)
G106224 NA non-coding downstream 616285 20272063 ~ 20276305 (-)
G106212 NA non-coding downstream 675114 20217251 ~ 20217476 (-)
G106183 NA non-coding downstream 776722 20071482 ~ 20115868 (-)
G106300 NA non-coding upstream 4808 20911919 ~ 20912138 (-)
G106340 NA non-coding upstream 44649 20951760 ~ 20952855 (-)
G106448 LOC106604502,LOC105008787 non-coding upstream 888514 21795625 ~ 21799926 (-)
G106453 LOC103471465,LOC102309231,LOC102203450,LOC107738605 non-coding upstream 967701 21874812 ~ 21875126 (-)
G106454 NA non-coding upstream 1019742 21926853 ~ 21928367 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other downstream 1024688 19865614 ~ 19867902 (-)
G105970 rps14,RPS14,rs14,LOC100194652,LOC107685488,LOC107588790 other downstream 1479575 19410368 ~ 19413015 (-)
G105890 NA other downstream 1787321 19102293 ~ 19105269 (-)
AMCG00011316 LOC107664359,LOC107560145,LOC108427843,LOC107752026,LOC105007072,LOC103354679 other downstream 2701395 18180646 ~ 18191195 (-)
G105793 NA other downstream 2892145 17999668 ~ 18000445 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other upstream 1635538 22542649 ~ 22554137 (-)
AMCG00011399 NA other upstream 1836319 22743430 ~ 22753616 (-)
AMCG00011409 NA other upstream 2146202 23053313 ~ 23060966 (-)
AMCG00011414 NA other upstream 2485993 23393104 ~ 23489642 (-)
AMCG00011428 NA other upstream 2906746 23813857 ~ 23817543 (-)

Expression


Co-expression Network