AMCG00011376


Basic Information

Item Value
gene id AMCG00011376
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 20958864 ~ 20966129 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011376
CTGCCCATTCTGGCTCTTTGCTTGTTGAGTGCTGTTTTTTCTCTGGACCCTCTTACCCAACCCATTGGATATAAAGTTTTGGAAGAACAGCCCAGTGGGACCAGGATTGGAAAGTTGGCTGATGATTTGAGGTTGCGGGGAGCAAGCGGAGAGCTTGGGGACTTTCACATTGTGGATCATGTTCGAGCCCTGCCTTTTGTTGTGGGAGTAACTGATGGAGCTGTTTCGACTGTGGGCCCCCTGGACCGAGAAGCACTTTGCAAGGATAGCGACCCCTGTGTGATTCAATTCAACGTGCTTTACAGAAAAGGAGGTGCCATAGACTTTTTGCAGGTGATGGTGGAGGTCATGGATCTCAACGACCACAGCCCCTCCTTCCCGAACATTGAGCAGGAAATTGAGATTTCAGAAACTGCCACACTGCGCATGCGGATTCCTCTGGACAGGGCGCAGGATCCCGATGCTGGGCCCAATGCACTCCAGACGTATTCTTTGTCCCCCAACCAGCACTTTGCCCTGGATGTTGTCACTCGCTCGGAGGGCACCAAGCACGCAGAGTTAGTGGTCATCAAAGAACTGGACAGAGAGGTTCAGTCCTCTTTTGAATTGACTCTGGTtgcctgggataaaggcaaTCCCCCCCGATCGGGCAGCACACTGGTGAAGGTCAATGTCTTGGACTCCAATGATAACAGCCCAGTTTTtgaggacagtgtggtcactgtCGAGCTCAGTGAAAACACTCCTCGAGGGACCACCGTCATTAACCTTAAAGCCACAGATCCTGATCAGGGGGCCAATGGAGAGATTGAGTATTCCTTTAGTAAGCATGTCCCTTTAGATGTGCAGAACCTCTTTGCTATTGACCCCAAGACAGGTGCGGTGACCCTCATAGGGGAATTGGACTATGAGGAAAAGCGGAATTATGAGATTGACATTCAAGCCAGGGATCTGGGACCTAATGCCATCCCTTCCCATTGCAAACTGCAAATTAAGGTCTTGGACGTCAATGACAACGCACCCAACATTCTTGTCACCTGGGCACCACAGGATTCCGATGTTGCTTTGGTGTCTGAGGCTTCCACTGTGGAAACGTTTCTTGCTTTGGTGATGGTGTCTGATGCAGATTCCGGGGACAACGGGAAGGTACATTGCCAGATTAAGCATGGGCAGGGACATTTTCGGCTAAAGAAGATCCACAGAGACAATTACATGATAGTAACCAGCGCTGTCTTGGACAGAGAGAGCAAGACAGAGGAATCCAGTGAACTTGTTAAATCTTCATTTACCATCCACCCTACTGATGGGGCCATTTATGCTCAACGGCCTTTTGATTTTGAGCAATCCAAGCACTTTACTCTGATCGTTGAGGCTACAGATCAAGGACACCGCCCCCTGACCAGCAGCACTACTGTACAGATAAATATTCAAGATGTCAACGATAACTACCCAGTTATTGAAGAACCAGTGCAAAAGAGGGGCAGGGCATCAATCAACATCCCAGTGAACATGGAGACTGGGGAGATAGTTACAGAGCTGGGAGACACGCAGACTGACTCAACATCAGACTACTTCTTTCAACTTTCCTCAGGGACTAACAACACTGCAGCAAGACTCAGGCTAGAAGGTTACCCAGCCTCCACAATTAAAGCGAGTGATATGGATTCAGGCATAAATGGAGCAGTTTGTTACAGAATTATAAACGGAAATGCTGGTGGCTTGTTTTTACTCGATGAATTTACTGGACAGATATATGTGAATACCAGCAATGCTACTGAATTGATCGGAAAAGTGTTTGAGATCGACATTGCTGTCTCAGACATGGGTTCTCCCTCGCTTGTTACCAAAGCTACTTTGGAAATAATTTTTATCAACCTCCAGGACCACCTCAAGAATTCATCCCCTGGACAAAAGGGGCAACTGAGCTTTACTATGATGTTAGTCATCTGTCTGGGTGCTACCTGCCTGCTCCTGCTGCTGGTGGCTGCACTGGTTACCACCTTTTGCCGAACAGAAAAACGAGACAATCATGCTTACAACTGTAGACAGGCCGAGTCCACTTACACCAGGCACCCCAGGCGGCCACAAAAGCACATCCAGAAAGCTGACATACAGCTGGTTCCTGTGCtgagagggagaaaggaagAACCAACTGAGGGGGACCCACAAAAACCATCCACACCTGTTGATGATGTAGTTCCTGACATTCAAGAGTCCTTTCTCCCCTGTCAGTTCAGCCTGTCTCCATCCCTCAGCAGAACCATAAGAAACCAGACCTTCCCAGAGGACAACAGAACACTCCCTCTGCCCCAAACAAGAACCCTACGCAAACCCAGCAACATTGAAATTGATGGCACTCTCCCTCGGACCCCAGCAACCCCTTACAGGACCCTCCGCAGGGCCAAGATCTCGGAGGACATTCCGTCAGCTCCAGATACTGTATCTCATATGGGGACATTAAGGTGCCAGGGAAGCCCAGAAATTCAACGTGGGTCTGGGGAGACCTCAGattcatcctcctcttctccaGCATTTAGGACATTGAGAAGACCCAGAAATGCCGAGACTAAGATGAAGCAAGAGAGTGAAGACCACCATCGGATCTTGAGGAATCTGGTCCGGATGTCTATGGCTGCCTTTGGGGAGTATAACCCCATTGAGCTCTCGTCAGCTTCACCAGAGGTACAGCAAGTCTCCCAGCTGCTTTCCCTGCTGCACCAGGGCCAGTTCCAGCCAAGACCAAACTTCCGGGGAAATAAGTACTCTCACAGAGCTGGCAGGTCTGGAGCACAGGATGCCGATTGGCTGAGTACCAAGGACAGTGGCCATGGAGAGAGCGAAGCCGGAGACATGGACTGGGACACGGGGCGAGACTCTCCCACTGACCACCTACTGGGGGAGGGTCTGGACACTCTGCTCAACAACACAGATGATGTGTTTTCAGATTTCCCCGACCCTGCATGGATGGCCCGCCTGTCCCTGCCTCTCACCACAGACTACAGGGAGAATGTCTTTGTCCCAGAGGACGCCCGACCCCCGGAGGAGTCCTCTCCCCTGGAGGCAGCCGAGGAGGGAGCAACCTGCTTCTCCACCTTCGGGAAAACTTCTGGCAAAGGTGTGGCGCTGCCCGGGCACCTACTCTCTGAGGTCAGCACCCTCTTCGAGATGCTGCTCACCCAGAAGGCCGACTCCCAGGCCCAGCCCGCTGCGGAGGTGCTGTACAGACTCTCCGCTGCCTACCGCCGCTCGCTGGGCCTGGACGGGGCGGCGGGGGGTGCTACACAAACGCGGCACTCAGGGGCTGAAAACAGGTCTCCCGCCGCACTGCCTGCTGAGCTGGACTCACCAGGCCACCACATGGTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011376 True 3366 mRNA 0.52 5 20958864 20966129

Neighbor

gene id symbol gene type direction distance location
AMCG00011375 NA coding downstream 51753 20892590 ~ 20907111 (-)
AMCG00011372 NA coding downstream 230723 20713938 ~ 20728141 (-)
AMCG00011371 spock1,LOC106604788,LOC106611816 coding downstream 298257 20645503 ~ 20660607 (-)
AMCG00011370 trpc7,trpc7b,LOC107596405,LOC107654649,LOC108274464,LOC105903241,LOC103471336 coding downstream 414113 20499122 ~ 20544751 (-)
AMCG00011368 NA coding downstream 481783 20440474 ~ 20477081 (-)
AMCG00011379 NA coding upstream 10554 20976683 ~ 20977159 (-)
AMCG00011378 NA coding upstream 15280 20981409 ~ 20989043 (-)
AMCG00011377 NA coding upstream 28323 20994452 ~ 21007340 (-)
AMCG00011384 NA coding upstream 45742 21011871 ~ 21021937 (-)
AMCG00011385 mgat4b,LOC106604568 coding upstream 66673 21032802 ~ 21048249 (-)
G106340 NA non-coding downstream 6009 20951760 ~ 20952855 (-)
G106300 NA non-coding downstream 46726 20911919 ~ 20912138 (-)
G106278 NA non-coding downstream 343222 20615438 ~ 20615642 (-)
G106266 NA non-coding downstream 470676 20486271 ~ 20488188 (-)
G106224 NA non-coding downstream 682559 20272063 ~ 20276305 (-)
G106448 LOC106604502,LOC105008787 non-coding upstream 829496 21795625 ~ 21799926 (-)
G106453 LOC103471465,LOC102309231,LOC102203450,LOC107738605 non-coding upstream 908683 21874812 ~ 21875126 (-)
G106454 NA non-coding upstream 960724 21926853 ~ 21928367 (-)
G106509 NA non-coding upstream 1684371 22650500 ~ 22653658 (-)
G106527 NA non-coding upstream 1730458 22696587 ~ 22696846 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other downstream 1090962 19865614 ~ 19867902 (-)
G105970 rps14,RPS14,rs14,LOC100194652,LOC107685488,LOC107588790 other downstream 1545849 19410368 ~ 19413015 (-)
G105890 NA other downstream 1853595 19102293 ~ 19105269 (-)
AMCG00011316 LOC107664359,LOC107560145,LOC108427843,LOC107752026,LOC105007072,LOC103354679 other downstream 2767669 18180646 ~ 18191195 (-)
G105793 NA other downstream 2958419 17999668 ~ 18000445 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other upstream 1576520 22542649 ~ 22554137 (-)
AMCG00011399 NA other upstream 1777301 22743430 ~ 22753616 (-)
AMCG00011409 NA other upstream 2087184 23053313 ~ 23060966 (-)
AMCG00011414 NA other upstream 2426975 23393104 ~ 23489642 (-)
AMCG00011428 NA other upstream 2847728 23813857 ~ 23817543 (-)

Expression


Co-expression Network