AMCG00011379


Basic Information

Item Value
gene id AMCG00011379
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 20976683 ~ 20977159 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011379
ATGCCCCGTCTCAGAGAAGTGTTTGAAGATTTTGCTGGATTGCTAGACTTTTCTCCACTCAGCCCTAAAATACCAAATCCAGCCGGTATACTGAACTCTGGAAACCAGACATTCAACCCCAGAAAGGCCCCTGTGAGACGGCACGCCCATGTCTCCTCACTCGGCACACTCGACGACCACTCACGGTCAGCAGAGCTGGGCTTGGACCCTGGGCCCCCATCGCTCACACTCGGTGGACAGAAGTTCTCCTTCGTCAATGGCAAATGGGAGACCACAGAATCGACGAAGAGGTGTCAAGTCCTGAAACATAAAAACCAGGCCttgaaagaaaagaacaacTACCTGAGGCTGTGCAACGAGATTCTGCTAGACATGCTGAGCGAGGCAATGGCCATGCATCACATCCTGGAGCGCGACATGGGCTCTGATCGCAGGAGGACCCGAGGACGTCACTGCGGAGAGGCACCCGTCCAATAA

Function

GO: NA

KEGG:

id description
K23402 CBY1; protein chibby 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011379 True 477 mRNA 0.54 1 20976683 20977159

Neighbor

gene id symbol gene type direction distance location
AMCG00011376 NA coding downstream 10554 20958864 ~ 20966129 (-)
AMCG00011375 NA coding downstream 69572 20892590 ~ 20907111 (-)
AMCG00011372 NA coding downstream 248542 20713938 ~ 20728141 (-)
AMCG00011371 spock1,LOC106604788,LOC106611816 coding downstream 316076 20645503 ~ 20660607 (-)
AMCG00011370 trpc7,trpc7b,LOC107596405,LOC107654649,LOC108274464,LOC105903241,LOC103471336 coding downstream 431932 20499122 ~ 20544751 (-)
AMCG00011378 NA coding upstream 4250 20981409 ~ 20989043 (-)
AMCG00011377 NA coding upstream 17293 20994452 ~ 21007340 (-)
AMCG00011384 NA coding upstream 34712 21011871 ~ 21021937 (-)
AMCG00011385 mgat4b,LOC106604568 coding upstream 55643 21032802 ~ 21048249 (-)
AMCG00011383 mgat4b,LOC106604568,LOC107550986,LOC107745197,LOC107733437 coding upstream 86984 21064143 ~ 21074776 (-)
G106340 NA non-coding downstream 23828 20951760 ~ 20952855 (-)
G106300 NA non-coding downstream 64545 20911919 ~ 20912138 (-)
G106278 NA non-coding downstream 361041 20615438 ~ 20615642 (-)
G106266 NA non-coding downstream 488495 20486271 ~ 20488188 (-)
G106224 NA non-coding downstream 700378 20272063 ~ 20276305 (-)
G106448 LOC106604502,LOC105008787 non-coding upstream 818466 21795625 ~ 21799926 (-)
G106453 LOC103471465,LOC102309231,LOC102203450,LOC107738605 non-coding upstream 897653 21874812 ~ 21875126 (-)
G106454 NA non-coding upstream 949694 21926853 ~ 21928367 (-)
G106509 NA non-coding upstream 1673341 22650500 ~ 22653658 (-)
G106527 NA non-coding upstream 1719428 22696587 ~ 22696846 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other downstream 1108781 19865614 ~ 19867902 (-)
G105970 rps14,RPS14,rs14,LOC100194652,LOC107685488,LOC107588790 other downstream 1563668 19410368 ~ 19413015 (-)
G105890 NA other downstream 1871414 19102293 ~ 19105269 (-)
AMCG00011316 LOC107664359,LOC107560145,LOC108427843,LOC107752026,LOC105007072,LOC103354679 other downstream 2785488 18180646 ~ 18191195 (-)
G105793 NA other downstream 2976238 17999668 ~ 18000445 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other upstream 1565490 22542649 ~ 22554137 (-)
AMCG00011399 NA other upstream 1766271 22743430 ~ 22753616 (-)
AMCG00011409 NA other upstream 2076154 23053313 ~ 23060966 (-)
AMCG00011414 NA other upstream 2415945 23393104 ~ 23489642 (-)
AMCG00011428 NA other upstream 2836698 23813857 ~ 23817543 (-)

Expression


Co-expression Network