AMCG00011381


Basic Information

Item Value
gene id AMCG00011381
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 21227210 ~ 21236755 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011381
ATGGGGGAGAAGGACGTTCTGTACATTGATGCCCAGATTAACTCAAACTGGATAAGGAGCTTCCGTCCCATCGGCCCGGGCTGTGAGCTGCTGGTGTGGTATGGGGAGGAGTACGCCAGGGAGCTGGGCATCACCTTGGACATCCTGTGGGACAAAAAGAGCAGAGCCTCAGTTTTAAGGTCTTTCAATCTCAACCAGAAATGTAACAGAACTGTACTGgatgaaaagcaaaagcatCATGTGCAAGCCCAGACCACAGTGCTCCTCATCCCTTCACTCTACTTGGTGGCCTTCATCATTGGACTCCCAGCCAATGCCACAGCTCTATGGGTCCTTATAGCCAGAACCAAGAAGATGCCCTCCACTGCTTTACTCATCAACCTGACCAGCACAGACCTCCTGCTCATGGTGGTTCTTCCCTTCAGGATTGCCTACCACTTCCAGGGCAACAACTGGATCTTTGGGGAGGTCACCTGCAGATTTGTCTCTGCTCTGTTCTATGGCAACATGTATGGCTCCATTCTGTGTCTCATGCTCATCAGTATTGACAGATACATCGCCCTGGTCCATCCTTTCAGTGCCAAGGCCTTCAGAAGCAGAAAAAACTCCATCTGCATGAGTCTCGCTGTGTGGGTGGTTGTGATAGGGGCCATGCTGCCGTTGCTCCTCACTCGGCAGGCCTACACTGAAGACGACCTAAACATCACCCTCTGCCATGATGCTCTGCCGCAGGTGGTTCAAGAAAAAATGTTCTTTCCATACTTCACCAGCCTCTTCGCCATTGGCTTTGTCATCCCCTTGTGTGTCATCTTGTTCTGTTACGGCTCAATTCTGTGGACGTTGGTGTCCAGTGACAAGCGCTACATCCACGCAGTCAAGGTTACAGCGCTTGTGCTGGTGGTCTTCATTTTTTGCTTCCTGCCCAGCAACATCATGCTTCTCCTGCACTACTCCAGTCTGTTGGAGAATAGCGAGGAATTGTATTTCCCTTACATGATCAGTCTGGCTCTCAGCACCTTCAACAGCAGCCTTGACCCCTTCATCTATTACTATGTGTCTGATGATTTCAGAGCCAAACTGAGGAAGTTGTTTGTGTGCCACAGAACCAAGTATGAATTTACATCGGGGTCCTCAGCGAACACTGATTCGTCATCAAAGTGCAAGTCCAATGGTACAGGAATGACAGCCTTAAACAGAAGCACAGATCCAAGTTAATCTCTATTTACTTTGATATATCTTTGTTTAAATAAGACATTTACAAACATGGAATGGGCTTGGTAGTAAACCAAAAAAGCCCTGAGTTGTGATCAAAAGTTCTCAATTAGTGttactgaataaatacattcttgtaAAGACACTGcactttgaatacattttatttgatgtgttttttcaaGCTATTTTGGAGAATATTACCCATAAGGAgataatgagagaaaaaaa

Function

GO: NA

KEGG:

id description
K04236 F2RL3, PAR4; coagulation factor II (thrombin) receptor-like 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011381 True 1443 mRNA 0.46 3 21227210 21236755

Neighbor

gene id symbol gene type direction distance location
AMCG00011380 NA coding upstream 95675 21127110 ~ 21131535 (+)
AMCG00011374 NA coding upstream 268763 20954794 ~ 20958447 (+)
AMCG00011373 NA coding upstream 488186 20738382 ~ 20739024 (+)
AMCG00011364 NA coding upstream 1231240 19987249 ~ 19995970 (+)
AMCG00011363 NA coding upstream 1269576 19956472 ~ 19957634 (+)
AMCG00011387 NA coding downstream 82669 21319424 ~ 21385863 (+)
AMCG00011388 LOC105008787,LOC106604502 coding downstream 555773 21792528 ~ 21797963 (+)
AMCG00011390 pcdh1b,LOC107738605,LOC107740130,LOC107593598,LOC107680965,LOC106604502,LOC108438453,LOC107564069 coding downstream 632033 21868788 ~ 21876333 (+)
AMCG00011389 NA coding downstream 687204 21923959 ~ 21924258 (+)
AMCG00011392 NA coding downstream 1267217 22503972 ~ 22506745 (+)
G106362 NA non-coding upstream 92597 21134255 ~ 21134613 (+)
G106361 NA non-coding upstream 94780 21131698 ~ 21132430 (+)
G106347 NA non-coding upstream 194022 21028793 ~ 21033188 (+)
G106327 NA non-coding upstream 205091 21020210 ~ 21022119 (+)
G106310 NA non-coding upstream 274498 20952222 ~ 20952712 (+)
G106443 NA non-coding downstream 690144 21926899 ~ 21928577 (+)
G106455 NA non-coding downstream 695849 21932604 ~ 22062654 (+)
G106457 NA non-coding downstream 853302 22090057 ~ 22090265 (+)
G106464 NA non-coding downstream 1074959 22311714 ~ 22311963 (+)
G106478 NA non-coding downstream 1306524 22543279 ~ 22544072 (+)
G106242 NA other upstream 859987 20361208 ~ 20367223 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other upstream 887885 20296011 ~ 20339325 (+)
G106139 LOC108275110 other upstream 1064244 20095229 ~ 20162966 (+)
G105916 NA other upstream 2004789 19222055 ~ 19222421 (+)
AMCG00011328 NA other upstream 2109841 19107273 ~ 19117369 (+)
G106613 NA other downstream 2104553 23341308 ~ 23341765 (+)
G106618 NA other downstream 2119307 23356062 ~ 23356559 (+)
G106711 zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 other downstream 2511919 23748674 ~ 23753002 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other downstream 2599064 23835819 ~ 23844911 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other downstream 4371231 25607986 ~ 25662179 (+)

Expression


Co-expression Network