AMCG00011404


Basic Information

Item Value
gene id AMCG00011404
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 22744521 ~ 22749846 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011404
TCAACTAGCCTGCAGCCTTTAGGACCACTGGGGCGAGGCCTTGGCAACTGGCAAAGCCTGCGTCTCAGTTTTGGGCTGTGCGAGGTGCATGCTTGTCGCCACAGCCACTCACTCGTCCAGCTGTGGGAAGCGGGACAGGGGAGGCTTTTGCAGAGCCTACACAGTTGGGGAGCAAATATGGAGCCTAAGTGTCTTGAAGAGGAACTGACTTGTGCAATCTGCCTGGGCCTTTACAGAGAACCTGTTGTTTTACCTTGCCAGCACACTTTCTGCCGGAGATGTATCCGAGATTACTGGGCTAACAAGGGTCATTTGGAGATATATGACTGCCCTCAGTGCCGGTCCAGCTTTCCAAGGCAGCCAAGCCTAGAGAAGAACTTTACCTTGTGCAACATTGTGGAGAAGCTGTGGGCTCACAAGTCTCATCGTACTGCTCTGCTCACTGGCGTCACGTGCGATTTCTGTGCGGACGGCTCCTCTCAGGCCTCCAAGACTTGCCTAAAGTGTGAGACCTCCTTCTGTGCTTTCCACCTGCAGGCTCACCTCACTAAGCTCAACCCAAGGGAGCACAGGCTGGTTGACCCGCTGACCACCTTCTCCAACAGGAAGTGTGCTGAGCACGGCAAGGCGCTGGAATTCTACTGCAGGGAAGACCaatgctgtgtctgtgtgtcctgcagtgtcCTCGGGTGCCACAGGAATCATGCTGTAGCTTCCCTGGAAGAAGCTGCCAGTGAGGCACTGAAAGATGAGATAGCAGGTCTTCACAAGGAGCTGTTCAGCTTCAGCATTATGAAACTAGACCTGAAAAAAGCAGAGGCTGAGTTTAAGGTGTATGTTGACAGTCTAACCAAGCTCACATCACAGAACTTCAGAGAGCTCCAGAAGAGGCTGCAGGAGGATGAGCAGTACATGCTGAGGGAGATTACCTCCAAGAGGAACAGCGTGTTGGCCAGGGTTAAAGAGCAGTGCAAACAgattgacagagctgcagaaaacaaaaagctcagAGAGAGCAACATTCAGGACATGATGAACAGAGACCCTTTCTCTCTTATTCAGACAAAAGATTTCCTGGAAGCACATATTGCGGATTTATCCTTGGACAAAGAAGAAGTGTTAAAAATTGTGAAGGACAGGCTAGACGAGACACAGATATACCATTCGGCTATATGGAACATTATgaATAGTCGAAGTCTGAATTTTGACGTGAACTCCGCCCACCCTAACTTAATCATCTCAGAGGATGGGAAAACTGTGAGCTGGTCAGACTCCAGACAGCCTTATCTTCCACACGAGGAGAGATTCAACTTTGACTCTCAGGTCCTGTGCTCCAATGTCTTTAGCTCTGGAACCCACTCATGGGACGTCTGGGTGAACGGCGAATCCTTCAAGCTTGGCATCGCTTACTGCAGCCTGGACAGGAAGAAACTTCTGCCTTCCTTCTTGGGACACAACAGTGTGTCCTGGTGCATTAGTTACATTAAAGGAGACATAAAAGCTTGGCATCAAAACATTTGTACAAATGTGGCTCAGATTAATGACCCAACTTGCATCAGAGTTCAGCTGGATTATGAATCTGGGACAGTGTCTTTCTTCTATTTAACTGACACCTTGATTCacttgtatacatttaaaacaacattcaGTGAGCCAGTGTATCCAGCCTTCAAGTGTGGCAATAACACATCCATTAAACTTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011404 True 1704 mRNA 0.49 6 22744521 22749846

Neighbor

gene id symbol gene type direction distance location
AMCG00011396 NA coding upstream 52716 22669741 ~ 22691805 (+)
AMCG00011397 LOC108416539,LOC105007475 coding upstream 93687 22646032 ~ 22650834 (+)
AMCG00011395 NA coding upstream 113924 22604016 ~ 22630597 (+)
AMCG00011394 NA coding upstream 140946 22599918 ~ 22603575 (+)
AMCG00011392 NA coding upstream 237776 22503972 ~ 22506745 (+)
AMCG00011405 NA coding downstream 2804 22752650 ~ 22785942 (+)
AMCG00011406 NA coding downstream 47632 22797478 ~ 22797829 (+)
AMCG00011407 NA coding downstream 48192 22798038 ~ 22798793 (+)
AMCG00011402 si:dkey-280e21.3,LOC107664720,LOC107662031 coding downstream 69915 22819761 ~ 22834827 (+)
AMCG00011403 thoc3,LOC102780803 coding downstream 85953 22835799 ~ 22839503 (+)
G106513 NA non-coding upstream 49677 22692737 ~ 22694844 (+)
G106485 NA non-coding upstream 177260 22564099 ~ 22567261 (+)
G106481 NA non-coding upstream 190031 22554259 ~ 22554490 (+)
G106479 NA non-coding upstream 197114 22547164 ~ 22547407 (+)
G106477 smad1,smad5,LOC107598346 non-coding upstream 200086 22544184 ~ 22544435 (+)
G106586 NA non-coding downstream 112762 22862608 ~ 22862952 (+)
G106588 NA non-coding downstream 179283 22929129 ~ 22935544 (+)
G106607 NA non-coding downstream 457400 23207246 ~ 23207477 (+)
G106609 NA non-coding downstream 603782 23353628 ~ 23355643 (+)
G106619 NA non-coding downstream 606888 23356734 ~ 23361014 (+)
G106242 NA other upstream 2377298 20361208 ~ 20367223 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other upstream 2405196 20296011 ~ 20339325 (+)
G106139 LOC108275110 other upstream 2581555 20095229 ~ 20162966 (+)
G105916 NA other upstream 3522100 19222055 ~ 19222421 (+)
AMCG00011328 NA other upstream 3627152 19107273 ~ 19117369 (+)
G106613 NA other downstream 591462 23341308 ~ 23341765 (+)
G106618 NA other downstream 606216 23356062 ~ 23356559 (+)
G106711 zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 other downstream 998828 23748674 ~ 23753002 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other downstream 1085973 23835819 ~ 23844911 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other downstream 2858140 25607986 ~ 25662179 (+)

Expression


Co-expression Network