AMCG00011423


Basic Information

Item Value
gene id AMCG00011423
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 23738776 ~ 23741793 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011423
ATGAGGCTGGGTCTAATTTTCAGCATATTGATTGTCACAGTTTTGCTGCTGGAATTCGGGAACAGCgaaaaaaatgaagatatgGAGACAAAGGcgtcagaaaagaaaaaacaaaaagggaaagcTAAACTTGGAAAGGTTGGGGCAAAGAAGGCCAAAGCCCCAACGACAAAACTGAAGCGTAAAAAAACCACTGCAAAACCAACCCCGCCCCTTCCTGTTGAGACAGTCCTAACGCAGGTGCTGGAGAGGGGGAAGTTCCAGAGAGTGGGTGATACTGTGACTGTGCACTCCGGCGACACCCTGGAGCTCCGATGCAAGGGCAAACCTGTCCAATGGACTGTCCCTTACTACTTGGAGGAAGAGGATGAAGGCAGACTCAGGACTACTCAGCATGAGAAGTATGGCTCCCTGATTTTGGTGAACTCCACGGGGGCGGACACTGGAGAGTACACTTGTTACCCCATGTACTGTGAGGGCACAGACTGCAGGAGGGAGTACGACAGAGCCGCCAGAGTCTTTGTCTTCTTTCCAGATCCCCAGGAGCTGTTTGTCCCATCAGCAGACTATTATGAAGTAGTGCAGCTGCGCACAAACCGGCCGACGACACTGCCCTGTCAGGTGACTTCCCCGCTGGCCAAGGTGACTCTGCATCGCGAGTTTCCCCCTGATGAAGTGAAAGTGGACGGGGTTGAGATATCCTTCAACATAAAGAAGGGCTTCACCATCCATCGGCCAAGAACTCATCATGCGGGCTCACTTTACTGCATGGCAAGCTACCAGGGCCTTCGCCAGATATCCACCAAATACATGCTCATTTATGTGAACTatcCCGTCTCTCCACCATCTCCTGTtatccaggcctcctccagctcggTCCACATGGGGGAGAATTTACAGGTGACCTGCTCAGTACAGGGGGAGGTTGATGTTGCTATTGATTTCACTTGGGAATACCCAGGGCAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011423 True 969 mRNA 0.51 5 23738776 23741793

Neighbor

gene id symbol gene type direction distance location
AMCG00011424 NA coding downstream 127265 23610729 ~ 23611511 (-)
AMCG00011421 NA coding downstream 176847 23518801 ~ 23561929 (-)
AMCG00011415 mtnr1al,LOC107664734,LOC105906227,LOC107598318,LOC107741107,LOC103391067 coding downstream 230412 23498826 ~ 23508364 (-)
AMCG00011413 sparc,LOC105030028 coding downstream 377626 23350909 ~ 23361150 (-)
AMCG00011412 g3bp1,LOC107567204,LOC107662011 coding downstream 392935 23341000 ~ 23345841 (-)
AMCG00011422 NA coding upstream 1285 23743078 ~ 23749052 (-)
AMCG00011431 tspan17,LOC107680656,LOC107749748,LOC107594893,LOC107653321,LOC106612270 coding upstream 224326 23966119 ~ 23979763 (-)
AMCG00011432 NA coding upstream 252345 23994138 ~ 24000458 (-)
AMCG00011433 NA coding upstream 347479 24089272 ~ 24102925 (-)
AMCG00011436 lrrtm2,LOC107750357 coding upstream 460962 24202755 ~ 24204323 (-)
G106682 NA non-coding downstream 147467 23591101 ~ 23591309 (-)
G106665 NA non-coding downstream 220973 23517378 ~ 23517803 (-)
G106606 NA non-coding downstream 561197 23177228 ~ 23177579 (-)
G106604 NA non-coding downstream 561647 23176857 ~ 23177129 (-)
G106603 NA non-coding downstream 562020 23176480 ~ 23176756 (-)
G106723 NA non-coding upstream 53887 23795680 ~ 23797219 (-)
G106817 NA non-coding upstream 840163 24581956 ~ 24582174 (-)
G106862 NA non-coding upstream 1174371 24916164 ~ 24919197 (-)
G106885 NA non-coding upstream 1245012 24986805 ~ 24991176 (-)
G107035 neurl1b non-coding upstream 2264186 26005979 ~ 26006456 (-)
AMCG00011414 NA other downstream 249134 23393104 ~ 23489642 (-)
AMCG00011409 NA other downstream 677810 23053313 ~ 23060966 (-)
AMCG00011399 NA other downstream 985160 22743430 ~ 22753616 (-)
AMCG00011391 smad5,LOC107664766,LOC107563595,LOC105912044 other downstream 1184639 22542649 ~ 22554137 (-)
AMCG00011356 ndufa2,ndua2,LOC106602938,LOC107661794,LOC107569768 other downstream 3870874 19865614 ~ 19867902 (-)
AMCG00011428 NA other upstream 72064 23813857 ~ 23817543 (-)
AMCG00011427 NA other upstream 87504 23829297 ~ 23835074 (-)
AMCG00011445 higd2a,LOC107750386,LOC107594954,LOC107677392,LOC107595747,LOC107749757 other upstream 1270412 25012205 ~ 25018332 (-)
AMCG00011465 NA other upstream 2275383 26017176 ~ 26019400 (-)
AMCG00011485 cxcl14,LOC107598373,LOC107664788,LOC107567480,LOC107664739 other upstream 2765150 26506943 ~ 26516507 (-)

Expression


Co-expression Network