AMCG00011439


Basic Information

Item Value
gene id AMCG00011439
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 24817579 ~ 24824029 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011439
ATGCCGCCTCCTCCGCCCCCGCCGCCCAGAGACCCTAGGATGCCGCCTCCTCCGTCCCCACTGCCCGGACCCCTGGGATGCTTCCTCCTCCGCCCCTGCCGCCCAGAGCCCATTGGATGCCTCTTCCTGCTCCGCCCCCTGCCGCTAATCGTTCTTGATAACAGTCAATTGGTCATGACCACGCCCATTCTCCCTTTCAGCCTGACTCCCAAGAAGAAGTACAAGCCAGAAGTCCAGCTCAGAAAGCTTCACTGGAACTCAATTGATGTCAAGAATCTCACCAAAGACTGCTTCTGGGCAAATCTGAAGGAAGATCGCTTTGTGACCAAGGAGCTCTTTGACGAACTCACCTCATCCTTCGCCGCTAAGTCCCAGAACAAGGATGGAGAGGATGAGGAGGAAGGACCTAAAAGGAAGAAGATCAAGGAGTTGAGAGTGCTGAATTCTAAGAAGGCGCAGAATCTCTCCATCCTCTTGGCCAATTTCAAACTACCATTTCACGCGATGAAGGAGGCCATTCTGGAAGTGGATGAGGAGGTTCTCACTGAAACTAGAGTGGAGAACCTGCTAATGCTCCTTCCTGGAGCAGAAGAGCTCAGTCAGTTGGCAGAGCTCAAAGACCAGTATAACGATTTGGACCCATCGGAGCAGTTTGGTGTTGTGATGAGCTCAGTGCCCAGGCTGATGGCTCGGCTCCACACCATCCTGTTCAAGCTGCAGGTCCAAGAACAGCTTGATGACATTCGGCCGGACGTGGAGTTAGTGACAGCGGCCATCGAGGGGCAGCGAGAGAGCAAAAGCTTCTCTgagctgctggagctgctcCTGCTGATCGGGAACTTCATGAATGCGGACTCCAACAATGCAGACGCCTTTGGCTTCAGCCTGAGCTACCTTGGCAAAACTTGTGAGGAAAAGTACACAGAAATGTTGCACTTCATCAAGGATCTGGAGCTTGTGGAGAGGGCCAGCAAAGTCTCCTTAACATTTGGGATGCATAGCTTTGTGACATCTGCGCGAGAGGAGTACGACACACTGGCCCTCAATCACAAGAACATGGAGAGGCAGTACAAGGAGCTGGGGGACCACTTGATCTTCAACTCTGAGACCGTCTCCATTGAGGAATACTTTGGGGACCTCAACAAGTTCCGGAACATGTTCCGGGATGCCCTGGAGGAGAACCACAAGAAGAAGGAGGCAGCCGAGAAATTCCAGAAAGCTAAGCTGGCGAAGGAGGAGgcaaaaaaggagaagaagaagaatcaaAAGAAGATGCAGCAAATGTGTGCAAGTAAGGAGGATGGTGACAGACAGTGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011439 True 1320 mRNA 0.52 9 24817579 24824029

Neighbor

gene id symbol gene type direction distance location
AMCG00011437 NA coding upstream 8755 24793372 ~ 24808824 (+)
AMCG00011435 ctnna1,LOC107594945,LOC107750356 coding upstream 575338 24209990 ~ 24242241 (+)
AMCG00011434 ctnna1 coding upstream 643075 24148957 ~ 24174504 (+)
AMCG00011429 NA coding upstream 879541 23909700 ~ 23938038 (+)
AMCG00011426 NA coding upstream 1003863 23786963 ~ 23813716 (+)
AMCG00011438 NA coding downstream 57327 24881356 ~ 24886761 (+)
AMCG00011441 NA coding downstream 91046 24915075 ~ 24916940 (+)
AMCG00011440 rnf44 coding downstream 147518 24971547 ~ 24986723 (+)
AMCG00011443 cltb coding downstream 179635 25003664 ~ 25014869 (+)
AMCG00011444 prelid1 coding downstream 220176 25044205 ~ 25047214 (+)
G106742 NA non-coding upstream 846396 23941012 ~ 23971183 (+)
G106718 NA non-coding upstream 984279 23829289 ~ 23833300 (+)
G106640 fat2 non-coding upstream 1276851 23539365 ~ 23540728 (+)
G106631 NA non-coding upstream 1295648 23382282 ~ 23521931 (+)
G106619 NA non-coding upstream 1456565 23356734 ~ 23361014 (+)
G106863 NA non-coding downstream 95822 24919851 ~ 24943678 (+)
G106871 NA non-coding downstream 114993 24939022 ~ 24940823 (+)
G106874 NA non-coding downstream 162809 24986838 ~ 24991237 (+)
G106906 NA non-coding downstream 223495 25047524 ~ 25049147 (+)
G106946 NA non-coding downstream 513523 25337552 ~ 25337767 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other upstream 972668 23835819 ~ 23844911 (+)
G106711 zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 other upstream 1064577 23748674 ~ 23753002 (+)
G106618 NA other upstream 1461020 23356062 ~ 23356559 (+)
G106613 NA other upstream 1475814 23341308 ~ 23341765 (+)
G106242 NA other upstream 4450356 20361208 ~ 20367223 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other downstream 783957 25607986 ~ 25662179 (+)
AMCG00011476 NA other downstream 1532138 26356167 ~ 26360775 (+)
G107202 NA other downstream 1946409 26770438 ~ 26771214 (+)
AMCG00011488 NA other downstream 1994023 26818052 ~ 26842792 (+)
G107394 NA other downstream 2888177 27712206 ~ 27727867 (+)

Expression


Co-expression Network