AMCG00011449


Basic Information

Item Value
gene id AMCG00011449
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 25106328 ~ 25114493 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011449
ATAAAACCACTAGCTGCTGAAATGCTCTCCTGTCACTGGGAAGTAGCTACTAGCCATCAGAGGAAGCTACACCCTAGAGAGTGTGTTAGGCTGATAGCCTAGCCACCGTGCTTGCCTGACCTACAGCAGTAACATGGAAAACCCAGCCAAGGAGGGGATTTTGTACATGCAGGGCGCTAAGTTTGGGATGAAGAGCTGGAGGAAGATGTGGGTGATACTGTTCGCTGCCAGCCCCTACGGGATCGGCCGAGTGGAGCTGTACGACGTGCGGGACGGGGGCAGTGGGGCGGTTGGCATGGCCGGGAAGCAGTATCTGAAGAAGGCTGACAAGAAGGTGATTCGCTTGGCTGACTGCATCAGCATCACCCCCGCCCCTGGCGAGAGCTGCCCCAAAGACAATGCGGCCTTCTACCTCAACACTACCCAGCGCACCTACGCCCTGGCCTCTGAGCACGCCCAGGCATGGATCGCCAAGCTCTGCCAGCTGGCATTCAAGAGAAATGATGAGAACCCGACCCCGATGAGCAGCCAGGATTGCGGAGAGGTGCCGATGGAAGAAAACGAGCTGTATTCGTCCTGGAAGGAAGAGAAAGAGTATGAAGTGACAGTGCAGAAGACCGAGGCATCCATGAGGTGCAGTCTAACGGGGAACTACACAATGGCACTCGACAAAGACAGCATCGTGCTGCTAGACCCCCAGAgcagacacacactgtactgctgGCCATACAGGCTGCTCAGACGCTTTGGCCAGGACAAGGATGTTGTGAGCTTTGAGGCTGGCCGGCGCTGTGAGTCCGGAGAGGGTCACTTCACCTTCCTGTCTAAAGACGTGCAGAGAATCTACAAGACCATTGAGGATGCCATCGGACAGCAGAGGAAGCAAATGAGCCGTGCCATTCCAGACCTGGACACAGTGTCCCTTCAGCCCTCTGCTCATAACTGCTCGGCACAGGACTTGGCCCCTGGCAGAAGTGCCCCTCCCACCTGGAGAGGGAGAACAAACGAGCCAACAGGAGAAGCCCCAGAGAGGGCACCGGTCCTTCTCCAAAAGCCAATCAGGAACCCCACGGAGCCAAACAGAAACATGAAACCCATCCCACAGGGGGGCAGCAATGTTGAAAGCACCCACGAATCTCCAGTCTACTCCACTGTGCAGGTGCCCTTTAAAAAAGATCTTGACCGAAGGGCAATTGAGAGACAGAAAAGCTTTCCCTCATTTGCCGCAATAGTGGAtgaaaaggaggaagaggaggaggaggagaagccGGAGGAGGGGGCAGATGAGGGTGAGGAGCCGGAGGAGGAGTCTGAGGGGGAGGggtcagaggaggaggagccagATGAAGAGGAGGAACGTTTTTTCTCTGTGCCCGAAAGCTTTAACATAGATAACTGGGCAGAGGAGACAAGCAGCTCTCCGCTTTATGACAACATTGTTAAGGTGAATAAGACTCGGGAGCAGCCCGAGGCGAAACATCGGGACGGTGCCCCGGGCTCGGAGTCGCATTATGCCCTGGCTAGCTTTAACCGGCGCCCCGAAGAGGAGGGGGTTGGTGAGGGGGAAACTGGCACGTTCTCGGGCCCCAGGTCTACCATTGTCACCAACACTGAAATACCCAATGATTTTAAGCAGAAACTTTCGGACTTGTTCGCCAAGGACAGGGTTAAAGTCTTACCAGCTCTGCCCACCCGCAACACTGGCATCACGGAGAGAATGTACAACAACTGAGATATTGTGTCCGCGGAGGATGTAATACTCTACTGGACAAGGTAGTCTTTGGTGTAAAAACTGTAGAGTCCAGATTTCTACTGTTGCTGTGTATATTAAGTTAgtaattaattttcttctttttcttcttttgttgcCTATGAGATTGAATATGATGTGCAACCTTGTGGAGTCattgttataatatttaaatattacaaatacaatgagAAGAATGTTACAGCTTCTTCAACACTATCAGACATCATACAGTTGTGCATCCCAAATTAATGCTCCATGGCTCGTTTatggttttttatttttcctgtgctAAGATTTTACCCATCACTTAATAAGCTGCATTGAATaaagcagacaaacaaataaatatttaaaaaacaaatttgatGCATGATATCCAACAGCCTTAACTGGATTTTCTTTCTAAGGCCTGAATAATGATTTAATAGATACTCAAAacaaattgttaaataaattatcaaGCCCATACATATTATGACCTGTGTtcaatcatgtatttttaaacacaataaataaaatggtacTAACTAAAAGCAAAGacacatacatgaataaatatacattcattaaatagataaagaaacaaaaaaatcacacaagtacacaatttatctttttataaaaactgcttttaaacaattttaactTTTCCATATTTATAAACGTGTATTTGGAATTAAAAGTAGAATACCCTGGTGTTGGTATAAATGTTCACTTGGTtgataaaaactgaaactgaatttaAACTGCTTGTTGTTAGCTTCGCTTTTCTGTGTTGttacttgatttaatttattggaaACGGtaagaaaattatgttttattaaagcaaatcaaattaattagcCACATAGTTAATCTTTAAACAGCTTAAACGTTTAGTTAGTTGGTGACACGTACACAGGTATCCATCTATATATTGTCTTTCAAATGTTTGGCACTATGGTTTCCCTTTATGCCTTATTCATTTTGcttatacttttattgtttcttaGAATTTAAACAAGCAGCtgaacacattaattaattaactaataaataagtaaataagacTGGAG

Function

GO: NA

KEGG:

id description
K24036 DOK3; docking protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011449 True 2811 mRNA 0.45 5 25106328 25114493

Neighbor

gene id symbol gene type direction distance location
AMCG00011451 ddx41 coding upstream 1223 25094529 ~ 25105105 (+)
AMCG00011450 NA coding upstream 12840 25071737 ~ 25093488 (+)
AMCG00011444 prelid1 coding upstream 59114 25044205 ~ 25047214 (+)
AMCG00011443 cltb coding upstream 91459 25003664 ~ 25014869 (+)
AMCG00011440 rnf44 coding upstream 119605 24971547 ~ 24986723 (+)
AMCG00011453 NA coding downstream 55007 25169500 ~ 25170670 (+)
AMCG00011452 NA coding downstream 56215 25170708 ~ 25171196 (+)
AMCG00011458 NA coding downstream 647343 25761836 ~ 25766078 (+)
AMCG00011461 NA coding downstream 688419 25802912 ~ 25811978 (+)
AMCG00011460 NA coding downstream 735080 25849573 ~ 25877546 (+)
G106906 NA non-coding upstream 57181 25047524 ~ 25049147 (+)
G106874 NA non-coding upstream 115091 24986838 ~ 24991237 (+)
G106863 NA non-coding upstream 162650 24919851 ~ 24943678 (+)
G106871 NA non-coding upstream 165505 24939022 ~ 24940823 (+)
G106742 NA non-coding upstream 1135145 23941012 ~ 23971183 (+)
G106946 NA non-coding downstream 223059 25337552 ~ 25337767 (+)
G106947 NA non-coding downstream 256986 25371479 ~ 25371745 (+)
G106961 NA non-coding downstream 551631 25666124 ~ 25667782 (+)
G106966 NA non-coding downstream 559923 25674416 ~ 25677419 (+)
G106973 NA non-coding downstream 583759 25698252 ~ 25720586 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other upstream 1261417 23835819 ~ 23844911 (+)
G106711 zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 other upstream 1353326 23748674 ~ 23753002 (+)
G106618 NA other upstream 1749769 23356062 ~ 23356559 (+)
G106613 NA other upstream 1764563 23341308 ~ 23341765 (+)
G106242 NA other upstream 4739105 20361208 ~ 20367223 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other downstream 493493 25607986 ~ 25662179 (+)
AMCG00011476 NA other downstream 1241674 26356167 ~ 26360775 (+)
G107202 NA other downstream 1655945 26770438 ~ 26771214 (+)
AMCG00011488 NA other downstream 1703559 26818052 ~ 26842792 (+)
G107394 NA other downstream 2597713 27712206 ~ 27727867 (+)

Expression


Co-expression Network