AMCG00011467


Basic Information

Item Value
gene id AMCG00011467
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 26127315 ~ 26135778 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011467
ATGCAGGCCAGCACACTCTCACACGCTCACTCTCACATTCCACCAGGACACTGCTCCGGGGCAGGGGAGAGAAGGATGGCGGACCAGGAGACCACGCCCATGGGGGACGCCCCTCCCACCTACATGCTTTTCCTCCTGgtcctcttcttcttcctcacGGGCCTCCTGGGGTTCCTTATCTGCCATGTCCTGAAGAAGAAGGGTTACCGCTGCCGGACCGGAGAGCCAGACGAGGAGTGTGAGGACAAGCTGGCGGGGGGAAATCAAGAGGAGGAAACTGAAGATACCAACCAGGACACAGTGGAGCAGATACTGAAGTGCATCATTGAGAACGAAGCAAATGTGGAAGCCTTGAAGGAGATGTTGGGAAACCAGAATGTGCCAGATCAAATGGACCACAGCGACCGCACCGGCAACGCCTGTCACCTCTGTGTCCAAGGCCGCACCAAGAAGGCCCGTGGCCGGAGCAGAGTGGCCAGGAGCAAGGCCCGGCCTGGGGAGCACATTGTGTTTTCCGTGGGGAGGTTCAAAGTCACCCACATCGGGAAGAAAAACAGCATCTCAGAGACCGCCAACCCCTCTGCCACCGAGCAAGAGCAAACCGGTGACCAATCGCAGGGCACCGAAACCCACACCCACCACACGCATGAGGAAAACGACCAATCACAGGGCAATGTGCGGGAGGAGTTCAACCTGAGGAACATGTTCAAAGACGTCAGCCCGGAGACGGCCAATGGGGCAGTCCAGATGCCAACTGGACCTGTTCCCACAGAGAACAAAGCCTGCCCGGAGACGGAGGGAGCAGATTTGCCCCCGCCTGAAGGGGAGAGGAACCCCAGTGCTGTGGAGGACGTGGGGGTGGATGGTGTCACCAAGACAGAGGCCATTCCTAACAGCGCAGGCACCAGTGAGGAGGTGCACCACAGCCCAGTCCGCATAGAGGAGGTCGTCATCGTGAGCTCGACTCCGGACAGGCGGGGCAATTACGTTGCGCTCCAGATGGAGGACGAGGTGGGACAAATGGAAGACGGCAAAGACGATATGATGGAAATGGAGGACATCAAGGACTGCAGGGTGAGccaagaggaggagggggaggaggtgtCGCGCGGCTCCAGAGAGTCAGGCCAGGGGAGCCACTCAGGGGAGAGCAAGAGGAGGTCCATCGTGGTGCACACTCAACACAAATGATCTGTCCATATCATCCTCAAGCCTACCATCTCAAGGTTACACTGAGCTTGTACTGTATCACCTGCCTGCCTCATTCTCTGTTGCCACTCTACCATATTGACCAGTAATGGAAGATGTAGTGCAGCTGAATCTGCAGAGGTACATGGTTCCTAACCGGGAAGAGATTCACAATACTGTCTGCTCCTTGTTCTGCTTAACAGCATCCAGATGTTTAAGGAGAGTACGTCTCCAGGCTTCCAGACAGTGTAATTGAATCAGATTGGTTGCTGCCCTGTGCCAGAGTTTAGGCCTCCATTGAaaatttagatattttaaaagctcTGTAGATTAAAAAAGCTGTTCTCTCCTGCCTGCATTGTGCCCTTCACTTTAGTAAAAGCAGTGCAGCCCACTCTCAGTTCCCACTAAGCCTTCTTTGTGTCCTCCGGATtgatcagaataaaataaatattgcttagTTAGCATTAATAAACACCAAAGCGTTTT

Function

GO:

id name namespace
GO:0065007 biological regulation biological_process
GO:0050789 regulation of biological process biological_process
GO:0050794 regulation of cellular process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011467 True 1677 mRNA 0.54 6 26127315 26135778

Neighbor

gene id symbol gene type direction distance location
AMCG00011468 LOC103355626 coding upstream 14461 26081951 ~ 26112854 (+)
AMCG00011466 NA coding upstream 91947 26034232 ~ 26035368 (+)
AMCG00011464 neurl1b coding upstream 115421 26005894 ~ 26011894 (+)
AMCG00011462 dusp1 coding upstream 210642 25913524 ~ 25916673 (+)
AMCG00011460 NA coding upstream 249769 25849573 ~ 25877546 (+)
AMCG00011473 hspa9,LOC106604950,LOC106611979 coding downstream 53354 26189132 ~ 26199349 (+)
AMCG00011471 fgfrl1b,LOC107740189,LOC107593239 coding downstream 104595 26240373 ~ 26242027 (+)
AMCG00011472 fbxo38 coding downstream 110149 26245927 ~ 26264527 (+)
AMCG00011483 hnrnpa0,roa0,LOC107598338,LOC105905838,LOC107567479 coding downstream 252516 26388294 ~ 26397982 (+)
AMCG00011478 NA coding downstream 266187 26401965 ~ 26409373 (+)
G107004 ergic1 non-coding upstream 238477 25882692 ~ 25888838 (+)
G106994 NA non-coding upstream 331703 25795413 ~ 25795612 (+)
G106973 NA non-coding upstream 406729 25698252 ~ 25720586 (+)
G106966 NA non-coding upstream 449896 25674416 ~ 25677419 (+)
G106961 NA non-coding upstream 459533 25666124 ~ 25667782 (+)
G107084 NA non-coding downstream 64172 26199950 ~ 26202619 (+)
G107098 NA non-coding downstream 141596 26277374 ~ 26292447 (+)
G107126 NA non-coding downstream 251970 26387748 ~ 26387984 (+)
G107128 NA non-coding downstream 311424 26447202 ~ 26451575 (+)
G107321 NA non-coding downstream 1331626 27467404 ~ 27468567 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other upstream 465136 25607986 ~ 25662179 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other upstream 2282404 23835819 ~ 23844911 (+)
G106711 zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 other upstream 2374313 23748674 ~ 23753002 (+)
G106618 NA other upstream 2770756 23356062 ~ 23356559 (+)
G106613 NA other upstream 2785550 23341308 ~ 23341765 (+)
AMCG00011476 NA other downstream 220389 26356167 ~ 26360775 (+)
G107202 NA other downstream 634660 26770438 ~ 26771214 (+)
AMCG00011488 NA other downstream 682274 26818052 ~ 26842792 (+)
G107394 NA other downstream 1576428 27712206 ~ 27727867 (+)
AMCG00011519 NA other downstream 2733364 28869142 ~ 28876355 (+)

Expression


Co-expression Network