AMCG00011482


Basic Information

Item Value
gene id AMCG00011482
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 26348588 ~ 26362055 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011482
ATGAAGCTGCTTAGTGAGTTTGTAAGCTGGACTAATCCGCTGTTAGCCCTCGACGCTGCCGGCCTGCTGGGAACCCTCCCGGTCTGCGGTGCTGATTGGACGGGGGCTTCAGACAGGGGCGGGGTTGACTCAACCTACTTCCCGGGAACTCTGGTTAAGGTGTTTGAGTGCCATGTGGTCAAGGTGGCCACCTGCTCTGTTATCCCAGACTCTCACCCTCCTGGGAGTATTTATGGAGCCAACCtgaccccccacccacccacccacccttGTCAGCAGGCCGCCAGGCTCCCAGGCACGCTTCCGCAGGGCCGTGACGTCACCGCCCCGCCCTCCGAAGCTGCCGTGCCCACAATGCCCCGCGCAGCGCTGCGTGTGAGAAGAAGCCGCTCCGCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011482 True 399 mRNA 0.63 5 26348588 26362055

Neighbor

gene id symbol gene type direction distance location
AMCG00011475 csnk1a1,LOC106604944,LOC107593197,LOC106611977,LOC107554841 coding downstream 13827 26320021 ~ 26334761 (-)
AMCG00011474 NA coding downstream 152738 26191126 ~ 26195850 (-)
AMCG00011469 NA coding downstream 185710 26138966 ~ 26162878 (-)
AMCG00011470 hdac3,LOC107688598,LOC102780161,LOC107746152 coding downstream 228573 26113869 ~ 26120015 (-)
AMCG00011463 ergic1,LOC107679115,LOC107660430 coding downstream 449761 25877496 ~ 25898827 (-)
AMCG00011480 NA coding upstream 336 26362391 ~ 26368116 (-)
AMCG00011481 NA coding upstream 7266 26369321 ~ 26369867 (-)
AMCG00011479 NA coding upstream 8118 26370173 ~ 26377379 (-)
AMCG00011484 LOC107598335,LOC107741069,LOC107664724,LOC107567475 coding upstream 84525 26446580 ~ 26490473 (-)
AMCG00011486 LOC106604933 coding upstream 209117 26571172 ~ 26641966 (-)
G107166 NA non-coding downstream 18979 26311843 ~ 26329609 (-)
G107082 hspa9 non-coding downstream 150755 26196112 ~ 26197833 (-)
G107057 NA non-coding downstream 220823 26094805 ~ 26127765 (-)
G107038 NA non-coding downstream 331908 26015984 ~ 26016680 (-)
G107037 NA non-coding downstream 336141 26009520 ~ 26012447 (-)
G107167 hnrnpa0,LOC105905838,LOC107664751,LOC107567479,LOC107598338,LOC107756703,LOC107741073 non-coding upstream 26157 26388212 ~ 26409375 (-)
G107232 NA non-coding upstream 471510 26833565 ~ 26833850 (-)
G107233 NA non-coding upstream 476112 26838167 ~ 26842786 (-)
G107237 NA non-coding upstream 548460 26910515 ~ 26910758 (-)
G107238 NA non-coding upstream 549953 26912008 ~ 26912220 (-)
AMCG00011465 NA other downstream 329188 26017176 ~ 26019400 (-)
AMCG00011445 higd2a,LOC107750386,LOC107594954,LOC107677392,LOC107595747,LOC107749757 other downstream 1330256 25012205 ~ 25018332 (-)
AMCG00011427 NA other downstream 2513514 23829297 ~ 23835074 (-)
AMCG00011428 NA other downstream 2531045 23813857 ~ 23817543 (-)
AMCG00011414 NA other downstream 2858946 23393104 ~ 23489642 (-)
AMCG00011485 cxcl14,LOC107598373,LOC107664788,LOC107567480,LOC107664739 other upstream 144888 26506943 ~ 26516507 (-)
G107713 NA other upstream 3263029 29625084 ~ 29625387 (-)
AMCG00011536 NA other upstream 3524161 29886216 ~ 29920020 (-)
AMCG00011543 rufy1,LOC102213688,LOC102302734,LOC100709430,LOC102791636,LOC106604316 other upstream 3829518 30191573 ~ 30233509 (-)
AMCG00011560 NA other upstream 5768439 32130494 ~ 32205554 (-)

Expression


Co-expression Network