AMCG00011509


Basic Information

Item Value
gene id AMCG00011509
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 27712140 ~ 27712957 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011509
ATGCGCTACGACTCTTATCGAGGCTCTATCGCGGAAGTGCCCGCAGTTCGAGCAACTGAGTCTCAGAGCGAAAGTTCTCCCCACCTGGCGCGGACGGGAAGAGGCTCCGTCTCCGCAGAACAAACCATGAGGCGGAAAGAAAAGCGGCTGCTCCAGGTCGCAGGGCTGTTGATCGCCGCTCTCCTGTTCCTGCCCAACGTGGGGCTGTGGTCTCTGTACCGAGACAGGGTGTTTGAGAACTCGCCGGAATTGGTGGAAGGGGCTGCCGGGCTTCCCGGTATACAGGCCACGTACTCCAACAGTGCCAGCTCCAGGATGTCCGGGAAGATGACTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011509 True 336 mRNA 0.60 3 27712140 27712957

Neighbor

gene id symbol gene type direction distance location
AMCG00011508 galnt10,LOC106603494 coding downstream 32994 27669795 ~ 27679146 (-)
AMCG00011507 galnt10,LOC103022003,LOC100711410,LOC102207837,LOC102305690 coding downstream 72660 27620509 ~ 27639480 (-)
AMCG00011506 sp30l,sap30l,LOC106603970,LOC105890504 coding downstream 105152 27598114 ~ 27606988 (-)
AMCG00011503 NA coding downstream 182187 27497309 ~ 27529953 (-)
AMCG00011501 NA coding downstream 288649 27415188 ~ 27423491 (-)
AMCG00011514 LOC105893206 coding upstream 178800 27891757 ~ 27895311 (-)
AMCG00011515 NA coding upstream 203976 27916933 ~ 27953143 (-)
AMCG00011517 NA coding upstream 311273 28024230 ~ 28025901 (-)
AMCG00011520 rars,LOC106568002 coding upstream 1085273 28798230 ~ 28816286 (-)
AMCG00011521 wwc1 coding upstream 1110701 28823658 ~ 28851487 (-)
G107383 NA non-coding downstream 96402 27613935 ~ 27615738 (-)
G107348 NA non-coding downstream 162273 27547207 ~ 27549867 (-)
G107308 NA non-coding downstream 303403 27408518 ~ 27408737 (-)
G107290 b4galt7,LOC106612238 non-coding downstream 419827 27247739 ~ 27292313 (-)
G107406 NA non-coding upstream 77938 27790895 ~ 27845007 (-)
G107409 NA non-coding upstream 170091 27883048 ~ 27883580 (-)
G107411 NA non-coding upstream 174510 27887467 ~ 27887769 (-)
G107471 NA non-coding upstream 850110 28563067 ~ 28563577 (-)
G107503 NA non-coding upstream 953205 28666162 ~ 28666386 (-)
AMCG00011485 cxcl14,LOC107598373,LOC107664788,LOC107567480,LOC107664739 other downstream 1195633 26506943 ~ 26516507 (-)
AMCG00011465 NA other downstream 1692740 26017176 ~ 26019400 (-)
AMCG00011445 higd2a,LOC107750386,LOC107594954,LOC107677392,LOC107595747,LOC107749757 other downstream 2693808 25012205 ~ 25018332 (-)
AMCG00011427 NA other downstream 3877066 23829297 ~ 23835074 (-)
AMCG00011428 NA other downstream 3894597 23813857 ~ 23817543 (-)
G107713 NA other upstream 1912127 29625084 ~ 29625387 (-)
AMCG00011536 NA other upstream 2173259 29886216 ~ 29920020 (-)
AMCG00011543 rufy1,LOC102213688,LOC102302734,LOC100709430,LOC102791636,LOC106604316 other upstream 2478616 30191573 ~ 30233509 (-)
AMCG00011560 NA other upstream 4417537 32130494 ~ 32205554 (-)

Expression


Co-expression Network