Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00011516 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 28548503 ~ 28556689 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0048738 | cardiac muscle tissue development | biological_process |
| GO:0007525 | somatic muscle development | biological_process |
| GO:0048798 | swim bladder inflation | biological_process |
| GO:0007368 | determination of left/right symmetry | biological_process |
| GO:0060047 | heart contraction | biological_process |
| GO:0042383 | sarcolemma | cellular_component |
| GO:0016012 | sarcoglycan complex | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00011516 | True | 298 | mRNA | 0.48 | 2 | 28548503 | 28556689 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00011512 | mrpl22 | coding | upstream | 589580 | 27952299 ~ 27958923 (+) |
| AMCG00011511 | LOC100196276 | coding | upstream | 632504 | 27908392 ~ 27915999 (+) |
| AMCG00011510 | NA | coding | upstream | 641652 | 27895516 ~ 27906851 (+) |
| AMCG00011504 | hand1,LOC106603969 | coding | upstream | 953499 | 27591655 ~ 27595004 (+) |
| AMCG00011505 | NA | coding | upstream | 964700 | 27556300 ~ 27583803 (+) |
| AMCG00011513 | NA | coding | downstream | 14933 | 28571622 ~ 28574341 (+) |
| AMCG00011518 | NA | coding | downstream | 220344 | 28777033 ~ 28789389 (+) |
| AMCG00011523 | rab24 | coding | downstream | 394621 | 28951310 ~ 28967738 (+) |
| AMCG00011525 | fgfr4,LOC106568015 | coding | downstream | 562153 | 29118842 ~ 29139529 (+) |
| AMCG00011526 | LOC106568009 | coding | downstream | 665662 | 29222351 ~ 29274495 (+) |
| G107450 | NA | non-coding | upstream | 260112 | 28288150 ~ 28288391 (+) |
| G107408 | NA | non-coding | upstream | 665107 | 27883095 ~ 27883396 (+) |
| G107402 | NA | non-coding | upstream | 674365 | 27790866 ~ 27874138 (+) |
| G107382 | NA | non-coding | upstream | 932765 | 27613961 ~ 27615738 (+) |
| G107331 | NA | non-coding | upstream | 1047061 | 27497327 ~ 27501442 (+) |
| G107502 | NA | non-coding | downstream | 109477 | 28666166 ~ 28666386 (+) |
| G107513 | NA | non-coding | downstream | 157434 | 28714123 ~ 28714489 (+) |
| G107530 | NA | non-coding | downstream | 239198 | 28795887 ~ 28863757 (+) |
| G107618 | NA | non-coding | downstream | 524542 | 29081231 ~ 29161742 (+) |
| G107661 | NA | non-coding | downstream | 765275 | 29321964 ~ 29323626 (+) |
| G107394 | NA | other | upstream | 820636 | 27712206 ~ 27727867 (+) |
| AMCG00011488 | NA | other | upstream | 1705711 | 26818052 ~ 26842792 (+) |
| G107202 | NA | other | upstream | 1777289 | 26770438 ~ 26771214 (+) |
| AMCG00011476 | NA | other | upstream | 2187728 | 26356167 ~ 26360775 (+) |
| AMCG00011455 | unc5a,LOC107677380,LOC107653334 | other | upstream | 2886324 | 25607986 ~ 25662179 (+) |
| AMCG00011519 | NA | other | downstream | 312453 | 28869142 ~ 28876355 (+) |
| G107741 | NA | other | downstream | 1140912 | 29697601 ~ 29699419 (+) |
| G107784 | NA | other | downstream | 1301281 | 29857970 ~ 29875476 (+) |
| G107858 | NA | other | downstream | 1615099 | 30171788 ~ 30212090 (+) |
| AMCG00011551 | NA | other | downstream | 2427290 | 30983979 ~ 31173789 (+) |
