AMCG00011518


Basic Information

Item Value
gene id AMCG00011518
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 28777033 ~ 28789389 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011518
ACAACTCTTGTTATTGGACTGAAAATCttgatttttttggtttggatAGAAATTGAAGCGAAGGAGGCCTGCGATTGGCTGAGAGCGGCTGGATTTCCTCAGTATGCCCAGTTATTTGAAGATTCCCAGTTCCCTGTTGACATAGACCTTGTGAAGAATGACCATGAATTTCTTGACAGGGATGCATTTGAGTCGCTTTGCAGGCgattaaacactttaaacaaatgtgtggaAATGAAGCTCGACATTAGCCAGCCAAGGAGAAGGAGTGACGAATCTGAAGATGAAGAGCCATGTGCCATTAGCACCAAATGGGCGTTCGAGAGGCACAGTAGGAGATGGTCACGTCTGGAGGGACTTGAGATCCCTCTAGCAGGAGAGCAATTCAACATCGGGGTTCCCGATAGCCCCTGCCTGAAAAAAGCAGCGAGCCAAGAAACATCCTTTTCCAATGCGGTGGAGAAGCACGACGCCTACTCTGTGCACAGCTCCAGCAGCGCAGAGAGTGACGGCACGGGCCTCCCCAAGACCTCTGAGGATATGGAGTCCAGCCGGAGCTCCTCCAGATGTTCCTCCAGCAAGGTGGCATCTCCTGACACCTCCTTCAGCGGGCCGCCGTCCCCCAATGAAATCCCGAGCTTGGGCAGTGAGGAGAAGCTCTTGGAGAAGCCTCCCAGGAAAAAGGGCAAGAGCCTGCTGTGGAAAATGGAGAAGCTGAGGATGCGAGGCTCCACGCTGAAGAGACCCCCCACTGGGAAAGCCAAGCCGCTCATCAGTGGGCCCATCATGCAGGAAGGCTTCGATGAAGACAAACTCAAGAGACTCAACTGTGTGGACATCGCTGAGCTCCAAGATTCCAAGAGCgatctctccttctccctgcGCTCCTACAGCAGTAGTAGTCCATCGGAGTGTAGCAGCACCATGAGCACCCCAAGTCCAGTCACCCGTGTGCGCAGCCACAGCAGAAAAGCCAGGGTGGCCTACATCGAGCGTGTCACCAACCCGGCCGACATCAACGAACAGGACTATAGAAATGAGAGGAACCGCCAGGAGAACCTCATCTTCCGTGTCCCACAAGGCCACAAACCTGGGACGTTCCCTAAAGCCCTCACCAATGATGTCCTGTCTCCCATGGATAACACCTCCGTTAACTGGAGAACCGGCAGCTTCCATGGGTGCAGAGAAAGAAGGTCAAGGAGTAACCCTTCCAAAGACCAAAATTCTCCCTGCAGTCCCCTAGCTACCTACGACAACCGGATCAGCATTTACGATAACGTTCATGGGATTCAGGCCCACCTCCAGAATGCAGGGCAGCCATCAGAGATGGGAGATGATGATGTTTTCACAGAGCTGGAAAGCATCATGGAGCCCATGAATGGACTTCAGCAGCTGTTAAGTAAGTGGACAGAGAAGCTGTCAGATGATGGGGACTCTGATTTTACCAATGACTCCACCTCCCCCTGCCCGTCCTCTCCAAATGAGATCCACCTCGAAATAAAGAAGCACGAAGAAGCCGACCCACTGATTACAGAAGCAGATGTTGACAGTTCTGACAAAATCACCAACAGCGAGGAATCGACTGAAACCCACTACATGACAGATTCTGGAGTTGGTTTGTCTCTGTCACATCACAGCAGGCAGTCCAGGTTACTCTGGTCCAGTGAACAGAACTTACATACAGAATTGTCCTGTCTAGGGATTGAAACTCAGTCAGCAGCTCAACTCAATCTGCTGCAGAAACTGTCTTTGCTTAAACTCACAGCTTTGATGGATAAATTCTCCCCCTCCAGCAAGCAGGGCTGGAACTGTGCCTTGATCAGATTAGGCGTTTTACCCTGGGGTTGTCATTGTTGCATCCAGGTGGGCTTGTTCCGAAAATCCGGAGTGAAGTCACGCATTCAGGCCCTGCGGGAGATGAATGAGATGCAGCCAGACTCTGTGAGCTACGAGGGGCAGTCCGCCTATGATGTGGCCGATATGCTTAAGCAGTATTTCAGGGATCTTCCAGAGCCAATATTCTCCAGCAAGCTGTGCGAGTCTTTCCTCCATATCTACCAATATTTTCCAAAGGACCAGCAGTTTGCCGCGGTCCAGGCTGCCATCCTTCTGTTGCCAGACGAAAACAGGGAAGCATTGCAGGTCCTGCTCTGTCTCCTCCGGGACGTAGTGGATTGTGTCAAAGAAAACCAGATGACTCCCACCAACCTGGCTGTCTGCCTGGCCCCCTCTCTGTTCCACCTCAACACCCTGAAACGAGACAGCAGCACTCCCAGGTCCAGTCACAGGAAGTACAGCCTGGGTAAGCCCGACCAGAAAGACCTGAGTGAGAACCTGGCAGCAACACAAGGGCTGGCTCACATGGTGGCTGAATCCTCTCACCTGTTTCAGGTGCCACAGTACTGGGTATTCAGGCCTCACAACCGAACGCAGGACAGCAGTGAGAAGGACCAGGACCGACGCGCTCAGCTGGACATCTCTGTGCAGAACTTGCTGAAGGAAGCCAGGGACAAGTTTAAAGCCTGGGTCACCTGCTCTGGTCTTGACCAAGTAGACCTTGCTTTTAAAAAGCCAGAAGATGAGCACACATTGCGCCTGTGGAAAGTGTCGGTGGAAGTGGAGGCCACACAGAGCAACGTTCTCCACCGCATACTGAGAGAACAAAAGCTTTGGGAGAAGGACCTCCAGAAGTCGAAGGTCGTCGAGACCTTGGATAAAGATGCCGAGATCTACCACTATGTCATTCGCAGCCTGAGCCAGCAACCTCCGCGGGAATACGTGCTGCTGAGGACTTGGCAGAGCGATCCTCAGACAGGCACTTTGGTTGTGGCAGCCACTTCCACAGATCACCGGGACGTGCCACAGAAAGGCATCAGGGCCGAGGTGCTCACCTGCCAGTACTTAATCGAAGCCATAGGACTCAGAAAAAGCAGACTGACACACGTCTGTAGAATAGACTGCAGAGGCCGCACGCCAGAGTGGTACAACAAAATGTCTGGGCATATGCTAGCTGCTGACCTAATGAGAATAAGAGACTCTTTCAAACCTGAAATGAaagagacaaaaatataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011518 True 3072 mRNA 0.52 13 28777033 28789389

Neighbor

gene id symbol gene type direction distance location
AMCG00011513 NA coding upstream 202692 28571622 ~ 28574341 (+)
AMCG00011516 NA coding upstream 220344 28548503 ~ 28556689 (+)
AMCG00011512 mrpl22 coding upstream 818110 27952299 ~ 27958923 (+)
AMCG00011511 LOC100196276 coding upstream 861034 27908392 ~ 27915999 (+)
AMCG00011510 NA coding upstream 870182 27895516 ~ 27906851 (+)
AMCG00011523 rab24 coding downstream 161921 28951310 ~ 28967738 (+)
AMCG00011525 fgfr4,LOC106568015 coding downstream 329453 29118842 ~ 29139529 (+)
AMCG00011526 LOC106568009 coding downstream 432962 29222351 ~ 29274495 (+)
AMCG00011527 NA coding downstream 490000 29279389 ~ 29321857 (+)
AMCG00011529 dbn1,LOC107732329,LOC107692779,LOC107561701 coding downstream 582490 29371879 ~ 29417263 (+)
G107513 NA non-coding upstream 62544 28714123 ~ 28714489 (+)
G107502 NA non-coding upstream 110647 28666166 ~ 28666386 (+)
G107450 NA non-coding upstream 488642 28288150 ~ 28288391 (+)
G107408 NA non-coding upstream 893637 27883095 ~ 27883396 (+)
G107402 NA non-coding upstream 902895 27790866 ~ 27874138 (+)
G107530 NA non-coding downstream 6498 28795887 ~ 28863757 (+)
G107618 NA non-coding downstream 291842 29081231 ~ 29161742 (+)
G107661 NA non-coding downstream 532575 29321964 ~ 29323626 (+)
G107672 NA non-coding downstream 695483 29484872 ~ 29490870 (+)
G107709 NA non-coding downstream 808612 29598001 ~ 29598243 (+)
G107394 NA other upstream 1049166 27712206 ~ 27727867 (+)
AMCG00011488 NA other upstream 1934241 26818052 ~ 26842792 (+)
G107202 NA other upstream 2005819 26770438 ~ 26771214 (+)
AMCG00011476 NA other upstream 2416258 26356167 ~ 26360775 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other upstream 3114854 25607986 ~ 25662179 (+)
AMCG00011519 NA other downstream 79753 28869142 ~ 28876355 (+)
G107741 NA other downstream 908212 29697601 ~ 29699419 (+)
G107784 NA other downstream 1068581 29857970 ~ 29875476 (+)
G107858 NA other downstream 1382399 30171788 ~ 30212090 (+)
AMCG00011551 NA other downstream 2194590 30983979 ~ 31173789 (+)

Expression


Co-expression Network