AMCG00011526 (LOC106568009)


Basic Information

Item Value
gene id AMCG00011526
gene name LOC106568009
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 29222351 ~ 29274495 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011526
ctactactactactgttggATGAACTCCAGCAAGTCCGGCTTCCGTGTGTATTAATGTCCTATATCAACAGATGAGCTTAAAATAACCAAACCACAGGATCACACCCTGCTCGGCAATAGTCGCCAGTTTGCTACTGAAACTAGCTACGCATACGGATGCTAATTTCACGCGTTggattgttaatttatttatgtgtggtGATTGTCTACAGTGAAGTCTAGGTTGTTGATACATGTTTATTATGTTGATGGTATGCCTCGGAAAAAGCGAATGCGTTCGGAAGAATCTGACCAAGGTACATGCATACCCAGGAAAAAGCGTCTGGCTGGAAATAAGGGGCAAACCTTTGTTGTGTCTGACAACGAAAATCAGGAGCAGAATGAAGTGCCACAGTCAAGAGAAGGACGTTTGCGAAGCAGAGACAGGAATAAAGAGCAAGAGATGACAGAGGAAGAAATGATGGACCTGGCATTGAAGATAAGTGAATCTGAAGCCAGTAAGGTACTTTAccaggaggaacaggaggaggaggaagctgTGAAGTTGGCAATCGCACAGAGTCTGTCTGAGAACAGCACACATGATAAGAAGAACCAGCTTGGTTTGTTGAATGAGCAGGAAGGCCCAAAAGCAGGGAGCGAAGGGAAGGAACCTTTCAGCCATGAGAGGCACCCCTGTGACATCCAGTCAGATACAGAGTCTCTGTCGGGAAAGTATGGCTCAGAGCGCAGTCCTGTCCTCATACTGGAGAAACTGAGCCAGGATGTTTTGGGCACCTGCCAGGAGTCAGGTTTTGTGGTGTTCTCCCAGAACAGTCCTCTCACGTTGACGCCAAACAGGGGATCTGTGCCCTCTTCCAGTCAGAACTCTCCCCTCATGGAGAGCCCCACCTTTCCTCGGAGGTCCAGTGAAGTCCAGGCCTTGACCCAGAGGATGACGTCCCAGATATCCGATGAGGCAGACAGCAGTGGGGTCAGTGACGACGACAGGCTGGCAGGGAAGATGCCCGGGACTGACAGGAAGAGGAGGCAGAGCAGCCCACCTGTCGGAGGGAACAACAGAGCACCTCGGCACAGTTCTGAGAAGAAAAATGCTGATGAACCACTGGCAAAAGACCACATTGAGCAGCGGTGTCAGACCTGGGGTTTGAAGAAGAATGAAGAATTACATAGTCAGATGACATtgcactggacagaggaagaggaggaggaagatgtaAAGAAGGAAAATCAAGAAAGCTGTAAAGCAGATCATACTCCTTTCCCCCAGAAGAACGCTTCCTGGAATGCAGCCTCTGAGAAGGACTGCTTCCCAGATTCAGAGTCTCTGCCCAGGTATCCCTCCAGCTGCTTTGCTCCCTCATCGGCACCTGTCTCCCATGCAGACAAGGTGAGCCGAGACCTGGAGGGCAGCTGCCAGCCATCAAGTTCTGGGATGTGTTCACAACACCCGGCGCCCTCGGAGAGCTCACAGCCACGCCCCAGTGGCAGCCCCCCACTTCCCAAGAGTCCTGTCTTCTCCAAGAGAGGCCTCAGTGGGAGAGGAAGGAACCTGGAGAGCATGAGTGAACGGGGCCGCCTGAGGAGAAAGTTCACCTTCCGCAAACTGGATGTGGGAGAAGTGACGACAGCCGATGAGGACGATTGCTTTCTGCAGAAACAATCCTGCAGCTCCAGGCCGGCATCCAAAGCCAGCCACCCCTCCACGCCACCCACTCCACATAGAGAGACCTCCCAGGGGCAGCCGGGCCAGGCTCAACCAAGCCAGGGGAAGGGCGTTGTTCTGTATTATTGGGGCGTTCCCTTCTGTCCCAAAGGCCAGAACCCAGATGACTACACTCAGGTGATCCTCTCTCAGCTTGAGGTATATGAGAAGAGCCTGAAGGAGGCTCAGAGGGGGCTGCTACGCAAGGCTGAATGGGGAGACCCAGTGCTCCCTGCCCCCTCTGATGAAACTGCGGGCAGAACAACCAGGCTGTTACGATTGAGAAAGAGCGAGAGTCAGAGCCAGGCATCCCAAGATCCAGACAGAGAGGGGGGTAggggggaagaggaggaggaggaggaggaagaggaggagaaggagaaggagaaggaagcAGAAGCATTAGGACACTGGGAGGATAGGAGAGGTGTGCAGCAGGACCGGCAGGACAGTGATGGAGAGAAGGGAACTTTGCAGAGAGAGGAGCAGGAGGAGTCTCCACTGCTGTTCACCCGAGAAGAGCCCAAGAGGAAACGATTATCTCTGAGGAGACGTCTGAGGATGGACAGCCCAGGTGAGACTGAAACATTGCAAAAAGAGGAGCTGGAGGTGGAAGTGTGTCCAGagacCCAAATGAGTGATGATGCCACCCAGCTGCTTAATTTGAACAGCCCCGCAAGGACTGAGGCCCCGCCAGacgtggtggtggtggaggatGACGCTGTGGCTGGTGATGAGGAGGGGCCTGACAGTGGGCCCTCTGCCCCCAGGCAGCAAGTCCGTGATAGTGTGCAGTGCCCTCTCTGCATGAAGAGTTTCCCCAGGCTGCAAGTGGAGGTTCATGCCGCCTACTGTGATGGCAACCTAGGGGAAGAGGATGTGTTGGAGGAGGCCAACATGCAAGCCTCTGCATTAAGACGGAGTAGCAGAAGAGCAGAAATATCTGAAAATCAGCCCAGTTCCTTTGCTTCTGCCAAATTGACACAGCAGGAAAAGTGCTTCATCTGCAAAGGCTTTTTCTCTATTAAAGATTATAAGAGGCATATTGAAATCTGCATCAACCAGGACTCAAACAGGCCCAGTGAGggaaaatacttatttttgaCTGCTTTGGAACAATTGGAAAACAAGACATTAGGAAATGCAGAAGCTGAATCTTCCCAATCATCGCTCAGGCACAGAGTACACAGATAGAGAGCGACACCATGTGGGAAAAGTTGAGGAGTGGCTGCAGCCCTTCAGACTGCCCCGAGAAAAGCTCTGTGAAGTGTCCAGTAGGCTCCTGAAAGATATGGAGAGGGGCCTGGACAAGCATACCCACCACAGAGCACCCGTCAAAATGCTGCCCACCTTCGTGAGGTCTACTCCGGATGGCACAGAGTCAGGAGACTTCCTTGCCCTGGATTTAGGAGGAACCAACTTCAGAGTTCTCCATGTACGTGTGGAGGAAGAGGTAAAGAAAGTCCTGAAGATGGACAGTCAGATCTGCCCCATTGCCCCAGAGATCATGCTAGGAACTGGCACACAGCTATTTGACCACATCGCGGCCTGCCTGGCAGAGTTCCTAGAGGCTCTGGGAATCAAAGACCAGAAGTTGCCCTTGGGCTTCACCTTTTCCTTCCCCTGTGAACAGAAGGAAATTGACaagAGTATACTGATTTGCTGGACCAAAGGCTTCAAGTGCTCAGGGGTGGAGGGGCAGGATGTGGCAAAACTACTCCGAGATGCCATCCACAGGAGAGGGGATTATGACATTCAGTCAGTGGCCATGGTCAATGACACAGTGGGGACCATGATGAGTTGTGGCTACAGGGACCAGAGCTGTGAGATTGGCCTGATAATTGGGACTGGGACAAATGCTTGCTACATGGAGGAAATGAAGAACGTGAAAAGAGTGGAGGGGGAGGACGGGCGCATGTGCATCAATACTGAGTGGGGTGGCTTCGGAGACGATGGCTCTCTGAGAGACATTCAGACCGAGTTTGACATGGAAGTGGATCGCAGCTCTCTCAATCCAGGCCAACATGTGTTTGAGAAAATGATCAGTGGTATGTACCTGGGGGAGGTTGCCCGTTTGGTCCTGGTCAAACTGGCCAAGGAGAAGCTGCTATTTGATGGGGAGACATCAGAGGCCCTACTTTCGCTGGGTAAATTTGAAACCCGACACATCTCTGAAATTGAGGAGGATACAAATGGCCTGACCAGAGCTAAGGAGATACTGACAGAGCTGGGGCTGCCAGTCAGTGAAGAGGATTGTGGGATTGTGCGCCATGTATGCAGTGCTGTGTCCACACGCTCTGCCCAGCTTTGCGGTGCTGCCCTGGCAACCATCGCAAACCGTATCCGTACCAACCGTGGACTGGACCATCTGCGTACCACCGTGGGGGTGGACGGCACTGTCTACAAGAAGCATCCCAAGTTCAGCCAGCATCTGCAGGAAGCAGTGCGGTCTTTGGCTCCCAAGTGTGAAATCAGCTTCCTGTTATCAGAGGATGGTAGCGGGAAGGGAGCTGCCATGGTGACCGCGGTGGCCCAGCGACTGTCAAGTCAGTCCCGACTACTGGAGGACAGCGAGGAAGATGAGGAGAAGAGCTAACAAACTGTTCCCTCTCCCATAGGCAGGCTAGGCAGGAGCCAGTGCTTCACACTCTAGCAATGCACAGTTTGCTGTCcatcaaaaaaactaaaaaacaaaacaaaagctgtatACCTCCACCTCACACATTAGACCTGCCTGGGCAGAAAGGTGGATAGCATGTTTAGAAACTGgatctggaaaaaaacacaacttaatACTAAAACCCTCCCACCCTGATCCTATTTCCATTTTATAAAGTAATGTTTGGGTCCTCAGGTTATCAAAACATTGGATCACAGCCACTGAGCTTtatctttaaaacaacaaaccattgatgttgttttaaagataaagctgacttttttcccccattactattaaaacaatactttgcCTTTTTTCCACCCAGAATATATATTATCTTGCATAGATCATACTGTTCAGTGAATGTGCTTTTTTCTTCAAGGATATGCCTTCTGTAATTGAAGAGAGTGCTTTGTATAATAATCTGAGCACACTAATCAAAAATGCCATTATGCTACTGGACTTTGGAGTGAAGATATTGTTTATGGTTCCCATTTTTcttgttcatatatataatcAGGTTACCTGCCTTTGTTTCCCTAAAGTGCATTGTCCCACAATTTATGATATTCAGTGCTCAGGCATTTATTGAAAATctgaacattttcagtttcactgtGAGTGTAACGTGAATGGAGTGAAAAACATCATTTGGCAGCTGGTTTCACCTCCTACATGGTTTAATCTCGCTACTTTGGCACTTTTTCCttcacaaatcaaacaaactgtAACCAGACTATTGCAAAGATCCTTACAATGACCTACAAGCAACGACAAAAAaggaactgaaatgttttgtttttaatagaacTCATTGGGTGCTCTTCATTATAATCATTTTGCgctttaacatttttgaaatctgataaaaaaaaatgtaagaaagaaATTTGTATTGGAAAAGGAGTGTATAAGATTGGACAGGTATGAATgtcagacaaatatatatattggactTGCATTAATGTATGCAATTATATGGCAACGTTTACCATTATATTGCAACAGGTCGGAAAATAATCAGGCCAAGATCCGTTATTAtttctgtgtatatgtatatgtatcttATAGTTGAACTGGTTTTATTCTGTGATTcctatagtttaataaatacggtttattaaactatacttatttatgaaacttaataaatcactgcataacattgtttaaaaagaatGACGAATGGTTTGAATGCGGTACTTTGAACTGTATTGTAAGGACATATTATGCAATCTACATGCTGTGAAATGCTTGTCAGTGAATTGACATCCTGAtattgctgatttaaaaaacaatgcagtaaTTAGATTTGGTTACAAAAGCAATTACACCCCAATCCAGTTTCCttggcattttttaaataacagagtAATTGCTATTCATCTGCACTCATTATTTCATTGCAGTGAGCCAAACTATAATGGGTTTTATAGGTTGCTTGGAaaacatgttaataataattttttataCCTTATACTGcctaataatttttttaatgatgcaaATTTCAGTTTGCAAAGAGAATACTTGTCTGACTGTCCAAAGCActatacatgtatttgaatCAATATTCCAAAGGCAAATGTCCTCAATTTGCATAGAAGAAAAAATCCAGTCTTAAAACGTCCAGTAGAACATTGTAGAATAAGTGCTGTCCCAAGAGATATAATGGTACATTGAAGGTATCGAGTAAgttaattgtatattatattttattgatcaaTAGCTTTAGAGATATTTATAACATGAGTTGCAAAATgggtaaaataagaaaaggccTATTTATCTAactagggctgggattaaatcaaaacccacACGCTAATAGGAAACTAGAGAACTGTACTGAGTtgctttcttctaatcataaatgtaaccactataatgtacaggtttgtagtttgctattagtgggtggttcaaagttttgatttaatcccgcCCTAGGTCActtaaatatcaatataattacatataaaatactgtagATTTTTACAGGTGCAGACCAACTTCAACTTAACGATTTGCTTAGAAGATGCAGCTTTACAACATGTTTTATGCAGTTTATTTGTGTTAGATATGAGGGTGGGTGAATTGTCAAAATATAGGGGTACAAGGGAaggttttttaaatgctgaaattCAGTTTTAGATATTACAGTTGTTTTTACATGGTACTGGTTGTAGGTGTTTgtgttatattaaaacattatttatatttggatCTGACTCGGGTCTATAGTATACAGGGTCTAAAATCTCAAGAATTTTATGCTAATACATCCAAATGTTTGTTACTTCTTTTGGTTTAATTTGCCGCTTACTGAATAAGAAAGTGTAGCTGTAGTACAAACAGCgtacaaataaacattacatttaaggaAAACAGTATTTCACTGAGTATTTCAATGCTTGAGGTTgagttaaatatgaattaaaatccAAAGCTTACTTTAGTTTTGCCTTGGCACAGTACAAATTGCAGTCTTTACAGTGAAGTACAGTATGCACAGTCATATTGGTACCATGTTTTGAAATCTATCTTTCCACTGTGTTGCTTGAAttttaatgctttgaaaacagTAATGACTAACTGGttgtcatttgtgtgtgtgctacaCTGGAATGTGCAATAAAAGACACCTCTAAATAAAGCAAGTTggatttattatttgcatttgaattggAGAACACTTATGAAATTCAGAGTCCATGTGTTTTGAAAGGATGAAGCCCAATATGTTTGCTGATACACTGTCAACCAATGTGAAATGACTTGTGGGATCAAGAAAATTTTGATAGCCTATAAATCGTACTTACTGTCAGTGTAAGATCACATTGTATACTATAACAGAAATGTGACAGACTTGCATACAAAACAATGTGAATCATATACCCACAtacagtcacctccaaaattattggcacccttgataaagCTGAGCAAAAggggctgtataaaat

Function

NR:

description
PREDICTED: hexokinase-2-like

GO:

id name namespace
GO:0046835 carbohydrate phosphorylation biological_process
GO:0006096 glycolytic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004396 hexokinase activity molecular_function

KEGG:

id description
K00844 HK; hexokinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011526 True 7333 mRNA 0.45 25 29222351 29274495

Neighbor

gene id symbol gene type direction distance location
AMCG00011525 fgfr4,LOC106568015 coding upstream 82822 29118842 ~ 29139529 (+)
AMCG00011523 rab24 coding upstream 254613 28951310 ~ 28967738 (+)
AMCG00011518 NA coding upstream 432962 28777033 ~ 28789389 (+)
AMCG00011513 NA coding upstream 648010 28571622 ~ 28574341 (+)
AMCG00011516 NA coding upstream 665662 28548503 ~ 28556689 (+)
AMCG00011527 NA coding downstream 4894 29279389 ~ 29321857 (+)
AMCG00011529 dbn1,LOC107732329,LOC107692779,LOC107561701 coding downstream 97384 29371879 ~ 29417263 (+)
AMCG00011530 NA coding downstream 143428 29417923 ~ 29436718 (+)
AMCG00011533 NA coding downstream 369673 29644168 ~ 29651012 (+)
AMCG00011538 LOC108439763,LOC104968126,LOC108278891 coding downstream 728705 30003200 ~ 30057500 (+)
G107618 NA non-coding upstream 60609 29081231 ~ 29161742 (+)
G107530 NA non-coding upstream 358594 28795887 ~ 28863757 (+)
G107513 NA non-coding upstream 507862 28714123 ~ 28714489 (+)
G107502 NA non-coding upstream 555965 28666166 ~ 28666386 (+)
G107450 NA non-coding upstream 933960 28288150 ~ 28288391 (+)
G107661 NA non-coding downstream 47469 29321964 ~ 29323626 (+)
G107672 NA non-coding downstream 210377 29484872 ~ 29490870 (+)
G107709 NA non-coding downstream 323506 29598001 ~ 29598243 (+)
G107712 NA non-coding downstream 350595 29625090 ~ 29625387 (+)
G107714 NA non-coding downstream 351246 29625741 ~ 29626058 (+)
AMCG00011519 NA other upstream 345996 28869142 ~ 28876355 (+)
G107394 NA other upstream 1494484 27712206 ~ 27727867 (+)
AMCG00011488 NA other upstream 2379559 26818052 ~ 26842792 (+)
G107202 NA other upstream 2451137 26770438 ~ 26771214 (+)
AMCG00011476 NA other upstream 2861576 26356167 ~ 26360775 (+)
G107741 NA other downstream 423106 29697601 ~ 29699419 (+)
G107784 NA other downstream 583475 29857970 ~ 29875476 (+)
G107858 NA other downstream 897293 30171788 ~ 30212090 (+)
AMCG00011551 NA other downstream 1709484 30983979 ~ 31173789 (+)
AMCG00011559 UBE2D2,ube2d1,LOC105015883,LOC105029919,LOC107680290 other downstream 2828378 32102873 ~ 32204915 (+)

Expression


Co-expression Network