AMCG00011555


Basic Information

Item Value
gene id AMCG00011555
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 31601507 ~ 31602428 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011555
GAACCAGCGTATCAATTAGAATCGGTGAAGAGTACCTACTACTGCAAGGCTCTCACCCCTCTGAAACCACAAAATGTGGTGGTGGTGAATGGCTGTGGCTCTTTGTACTGTTCGATCGCCGCAGTCCTGTGTGATCCTGATGATGGAATCCTAATCATCACTCCCTTCTATGGAGTGATTACTGATGACGTCAGACTCTACAGTGAGCACCAAGTTGCCCAACTGCTGCATGACAGAGACTGGATCAATCAGGTGTACCTGCCCACCAACATGGCGAGTTTGAAGATGGCCCACCACATGCTGGCCAGCGAACTCAAGGCCCTCGGCATCCCCTTCCTTGACCATACGTCTGGCTTCTTTATCTGGGCTGATTTCAGAAAATACCTCAGGGAAGAGACGTTTGAGGAAGAGAGTACCCTGTGGAGACTGTTCTTGAGGCACAAAGTCTTGTTAAGCTTTGGGAAAGCATTTGAATGCAGCACCCCAGGCTGGTTCAGAATTGTCTTCACTTACGAGGCCAATCAGGTTCAGTATGCAAAGACTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011555 True 546 mRNA 0.49 2 31601507 31602428

Neighbor

gene id symbol gene type direction distance location
AMCG00011552 NA coding upstream 397809 31196866 ~ 31203698 (+)
AMCG00011550 nrg2,LOC102784840,LOC100711745,LOC102211978 coding upstream 964207 30636382 ~ 30637300 (+)
AMCG00011547 NA coding upstream 1157099 30432974 ~ 30444408 (+)
AMCG00011548 NA coding upstream 1340150 30259538 ~ 30261357 (+)
AMCG00011545 NA coding upstream 1358288 30237315 ~ 30243219 (+)
AMCG00011556 NA coding downstream 67717 31670145 ~ 31709275 (+)
AMCG00011562 LOC102778048,LOC104948140 coding downstream 707138 32309566 ~ 32423292 (+)
AMCG00011564 LOC106563625,LOC105010896,LOC107589094,LOC101168142 coding downstream 830412 32432840 ~ 32436433 (+)
AMCG00011565 LOC104948140,LOC103368254,LOC104924602 coding downstream 847076 32449504 ~ 32451892 (+)
AMCG00011563 NA coding downstream 985769 32588197 ~ 32601514 (+)
G108035 NA non-coding upstream 2605 31598630 ~ 31598902 (+)
G108032 LOC107575789,LOC100846954 non-coding upstream 25614 31575593 ~ 31575893 (+)
G108025 NA non-coding upstream 39050 31562165 ~ 31562457 (+)
G108023 NA non-coding upstream 55902 31545314 ~ 31545605 (+)
G107987 NA non-coding upstream 381970 31219315 ~ 31219537 (+)
G108056 NA non-coding downstream 44169 31646597 ~ 31674103 (+)
G108067 NA non-coding downstream 191710 31794138 ~ 31794386 (+)
AMCG00011551 NA other upstream 427718 30983979 ~ 31173789 (+)
G107858 NA other upstream 1389417 30171788 ~ 30212090 (+)
G107784 NA other upstream 1726031 29857970 ~ 29875476 (+)
G107741 NA other upstream 1902088 29697601 ~ 29699419 (+)
AMCG00011519 NA other upstream 2725152 28869142 ~ 28876355 (+)
AMCG00011559 UBE2D2,ube2d1,LOC105015883,LOC105029919,LOC107680290 other downstream 500445 32102873 ~ 32204915 (+)

Expression


Co-expression Network