G102396


Basic Information

Item Value
gene id G102396
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 806994 ~ 807224 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU127871
acttgtaatattagtcctctatccctgctagatagcacttcacagttttatttgcttctcgcgttcttgattgttttcctccttgctccctttcccgcaGCCCTCGTCTGTatccctacatcttgacagcacttagctttcaccgtccaggatgtaggaagtctcttactgtacttgtgtaaattgtaaattggaatttgtaaaatgtattttgaattgctgttttagcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127871 True 231 lncRNA 0.40 1 806994 807224

Neighbor

gene id symbol gene type direction distance location
AMCG00010788 NA coding upstream 768771 35149 ~ 38223 (+)
AMCG00010789 NA coding upstream 774828 30968 ~ 32166 (+)
AMCG00010800 NA coding downstream 108510 915734 ~ 925202 (+)
AMCG00010801 sf3a3 coding downstream 144299 951523 ~ 957231 (+)
AMCG00010803 NA coding downstream 170025 977249 ~ 1008155 (+)
AMCG00010805 mtf1 coding downstream 205359 1012583 ~ 1028590 (+)
AMCG00010804 NA coding downstream 227460 1034684 ~ 1040844 (+)
G102373 NA non-coding upstream 243801 560886 ~ 563193 (+)
G102363 NA non-coding upstream 413941 392730 ~ 393053 (+)
G102361 NA non-coding upstream 519023 287752 ~ 287971 (+)
G102359 NA non-coding upstream 519303 287391 ~ 287691 (+)
G102344 NA non-coding upstream 650254 154155 ~ 156740 (+)
G102415 NA non-coding downstream 158737 965961 ~ 966205 (+)
G102516 NA non-coding downstream 667774 1474998 ~ 1475210 (+)
G102518 NA non-coding downstream 711175 1518399 ~ 1518698 (+)
G102520 NA non-coding downstream 740586 1547810 ~ 1548180 (+)
G102611 NA non-coding downstream 1367572 2174796 ~ 2175064 (+)
AMCG00010809 pdik1l,LOC107690927 other downstream 239178 1046402 ~ 1125186 (+)
G102531 NA other downstream 982964 1790188 ~ 1791723 (+)
G102535 NA other downstream 991216 1798440 ~ 1800751 (+)
AMCG00010830 NA other downstream 1137831 1945055 ~ 1963965 (+)
AMCG00010832 NA other downstream 1232290 2039514 ~ 2064344 (+)

Expression


Co-expression Network