G102415


Basic Information

Item Value
gene id G102415
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 965961 ~ 966205 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU127892
tttgctcaatactttgttgaagcacctttggcaccaattacagcctcaagtctttttgagtatgatgctgcaagcttggcacacctatttttgggcagtttctcccattcttctttgcaggacctctcaagctccatcaggttggatgggagagtcggtgcacagccattttcagatctctccagagatgttcaatcgggttcaagtctgggctctggctgggccactcaaggacattcacagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127892 True 245 lncRNA 0.48 1 965961 966205

Neighbor

gene id symbol gene type direction distance location
AMCG00010801 sf3a3 coding upstream 8730 951523 ~ 957231 (+)
AMCG00010800 NA coding upstream 40759 915734 ~ 925202 (+)
AMCG00010788 NA coding upstream 927738 35149 ~ 38223 (+)
AMCG00010789 NA coding upstream 933795 30968 ~ 32166 (+)
AMCG00010803 NA coding downstream 11044 977249 ~ 1008155 (+)
AMCG00010805 mtf1 coding downstream 46378 1012583 ~ 1028590 (+)
AMCG00010804 NA coding downstream 68479 1034684 ~ 1040844 (+)
AMCG00010812 NA coding downstream 127917 1094122 ~ 1099009 (+)
AMCG00010808 LOC106583270,LOC106605111 coding downstream 138978 1105183 ~ 1108360 (+)
G102396 NA non-coding upstream 158737 806994 ~ 807224 (+)
G102373 NA non-coding upstream 402768 560886 ~ 563193 (+)
G102363 NA non-coding upstream 572908 392730 ~ 393053 (+)
G102361 NA non-coding upstream 677990 287752 ~ 287971 (+)
G102359 NA non-coding upstream 678270 287391 ~ 287691 (+)
G102516 NA non-coding downstream 508793 1474998 ~ 1475210 (+)
G102518 NA non-coding downstream 552194 1518399 ~ 1518698 (+)
G102520 NA non-coding downstream 581605 1547810 ~ 1548180 (+)
G102611 NA non-coding downstream 1208591 2174796 ~ 2175064 (+)
G102622 NA non-coding downstream 1285898 2252103 ~ 2252470 (+)
AMCG00010809 pdik1l,LOC107690927 other downstream 80197 1046402 ~ 1125186 (+)
G102531 NA other downstream 823983 1790188 ~ 1791723 (+)
G102535 NA other downstream 832235 1798440 ~ 1800751 (+)
AMCG00010830 NA other downstream 978850 1945055 ~ 1963965 (+)
AMCG00010832 NA other downstream 1073309 2039514 ~ 2064344 (+)

Expression


Co-expression Network