G102531


Basic Information

Item Value
gene id G102531
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 1790188 ~ 1791723 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU128036
TACAACTACATtcgtttattaatttaatataacaaGATGATAATGCACAGTCAGTTTAGCCTTGGTTTATTGAGCTGCCAGTCTCTGTCTCTGATCGAGTCACTGGTCGCTCCGGGAGCTGGTCCAGGTGCGACCTCATCTCGCCCCACGGCCCCGTgcagaaacacaaaagacaTCACTGGACAGACATCGGCCGGAACGTCCAGAGCAGCGCTGTCGTCTCTCCGCCGGGCAGAGTCAGGGATGCACTTCTCACACCGCGCAGACGAGCACAGCGCAGCGCAGTCAGAGCCCAACGCAGCCCTGTGCCGTGCCATCGAGACGCACGCACTTGTGCAGAAACGCACTGCAAAGCACGAAGAGTCAGGAGCATCTACAGAAGGACCTTTATGTCGCAGTAAAGCAAAGGCCGCTGGGAAGAGACGGAATCGGATCCTGTCCCCTGACACACATCCATGCTTTCAAGTCCGACACGTCATGTTTAAACCTTCTCATGAATAAAGTGCTGAATcgttcaatgaaaataaatcacagggGTGAACAAagaccttctctctctccttctttatTTTGCTTCACTTAAGCCCCGGGGAGGAGTAGCAGGTGTGAGAGTGTTTTGTGATCTGCACTTTAATTGATCCACTCCTCTTCCTCAGGGAGAAACACTGAGTTCCTGTAGCTCGGGCTTGAATGATCAAACACACGGCAGCACTGCGCTGCAATcacaagacacagagacatcTCGACACCCGGGCCTGAtgctcacagacacacaacttCTACACAAATGACATCTTTGTCTACTTCAACAGAACCAACACTGAAACGACTTGTAACGGCTGAAAAAAACTGTCCGTATATTTAAGACAGACTGTGTAAATAAAGCgtatgtatttcaatttgaCAGCACCTATAATTGAGTATTTTCCTATAGATGCCACTCGTTTAATATGCTGCTATTGTTCGTGTTTCTGCCGATTTGTAAACAGTGTTTAAATCGATGCGTAGTTTAGGGCTTGACAAATCAACCCCCTCCTCTTGCCTGGCTGGGCGGCACAGATTCACTTATTGCAAGTCCAGTTCACATTAGATGCGAATAAAAGACCCGGAGGCAGGAGGACGTGTTTTTGAGTCTCCAGCTCCAGTCAGGTATGAAAGCAGCTCGTATAACCTCGGGCAGATCAGAGACGTGCAGTGAAATTCCCACAGAGACGGCATCGCTGATCGTCCTCTTAGAAGAGACAGAGGTTTGATCTACACAGTGCTGTGATTCTTACTTTTCCTTTCAACTGAAATCACTTCTTGACTTAATAAATATTCTTCAGTAGTCAGACAACCGAGAACGTGTGTTTTGGACAGTGGATgcaattgtcattttttaattttctgattGACTTAAATCACTgtgtacaatttaattattttgtctttaagcAAAATACTAATTATCCCAATGGCAAAGGTTTTAACTATATTTTTCTTCACCTCTTCAGGCTAGGATCCGTCATTTAAAGGtgaagagattttgttttttgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128036 True 1536 TUCP 0.45 1 1790188 1791723

Neighbor

gene id symbol gene type direction distance location
AMCG00010825 NA coding upstream 330199 1458829 ~ 1459989 (+)
AMCG00010824 NA coding upstream 332459 1457490 ~ 1457729 (+)
AMCG00010823 ptprub,LOC107705793,LOC107700666,LOC107704844,LOC107755971 coding upstream 337658 1428644 ~ 1452530 (+)
AMCG00010822 ptpru coding upstream 371221 1378997 ~ 1418967 (+)
AMCG00010820 LOC106604982 coding upstream 421320 1362897 ~ 1368868 (+)
AMCG00010826 LOC103361910,LOC100710164,LOC106570256,LOC105009339 coding downstream 59061 1850784 ~ 1859425 (+)
AMCG00010831 NA coding downstream 187896 1979619 ~ 1986242 (+)
AMCG00010833 rcc1,LOC107700729,LOC107735284 coding downstream 275942 2067665 ~ 2069500 (+)
AMCG00010837 NA coding downstream 566790 2358513 ~ 2363722 (+)
AMCG00010838 NA coding downstream 572487 2364210 ~ 2368559 (+)
G102520 NA non-coding upstream 242008 1547810 ~ 1548180 (+)
G102518 NA non-coding upstream 271490 1518399 ~ 1518698 (+)
G102516 NA non-coding upstream 314978 1474998 ~ 1475210 (+)
G102415 NA non-coding upstream 823983 965961 ~ 966205 (+)
G102396 NA non-coding upstream 982964 806994 ~ 807224 (+)
G102611 NA non-coding downstream 383073 2174796 ~ 2175064 (+)
G102622 NA non-coding downstream 460380 2252103 ~ 2252470 (+)
G102628 NA non-coding downstream 525214 2316937 ~ 2317570 (+)
G102655 NA non-coding downstream 657477 2449200 ~ 2449881 (+)
G102693 NA non-coding downstream 831883 2623606 ~ 2660858 (+)
AMCG00010809 pdik1l,LOC107690927 other upstream 665002 1046402 ~ 1125186 (+)
G102535 NA other downstream 6717 1798440 ~ 1800751 (+)
AMCG00010830 NA other downstream 153332 1945055 ~ 1963965 (+)
AMCG00010832 NA other downstream 247791 2039514 ~ 2064344 (+)
AMCG00010834 NA other downstream 278954 2070677 ~ 2073242 (+)
AMCG00010854 sh3bgrl3,LOC108273253,LOC106570239,LOC106588618,LOC105933927,LOC107580135 other downstream 964573 2756296 ~ 2762226 (+)

Expression


Co-expression Network