G102628


Basic Information

Item Value
gene id G102628
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 2316937 ~ 2317570 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU128151
tacagattaagttgctaggcagacatggaaTGTGTCCGATATCATAACTCCTAACACACTCGAGAGTTTCGGTTGACATGTCTGCACGGTTTGCCTAGCGCTAGATGACGTGGGACTCtatcttatttctggtttgtctgaagagcagcatgtatattgtttatgttgtcagctctgagctgttcctcaaaacataatataaatatagggagattgtggtttgacatttccaaaatagaGGTGAGGGGATGGCCGTGAGTTCAAGTGTCtagactttcacagaaatagttatgcgcgagtatgttatttatgttatttctgcaataattacAAATTTCAGCCCCCCTTGCCACGGCAACATTTCCTCCAGTGAGATATGACAATGTTAACTCTGCAACTTCTGTTAAAggctaatcctacaataagaatacaatacaatgagttacatggttacagtaggttaaataatcagtatgcctaCCAGACTTAATTATCCCCAACAgttagtatatgaatatgttatctAAAAATCCATGTACTCTGTTCTCCcaacatgcagagtattatacagtgggtatatacaatacatagggggcaattttaccccaacacttTCTTATTTTAGATCAAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128151 True 634 lncRNA 0.38 1 2316937 2317570

Neighbor

gene id symbol gene type direction distance location
AMCG00010833 rcc1,LOC107700729,LOC107735284 coding upstream 247437 2067665 ~ 2069500 (+)
AMCG00010831 NA coding upstream 330695 1979619 ~ 1986242 (+)
AMCG00010826 LOC103361910,LOC100710164,LOC106570256,LOC105009339 coding upstream 457512 1850784 ~ 1859425 (+)
AMCG00010825 NA coding upstream 856948 1458829 ~ 1459989 (+)
AMCG00010824 NA coding upstream 859208 1457490 ~ 1457729 (+)
AMCG00010837 NA coding downstream 40943 2358513 ~ 2363722 (+)
AMCG00010838 NA coding downstream 46640 2364210 ~ 2368559 (+)
AMCG00010847 LOC106588610,LOC105012636,LOC108411273,LOC107700831,LOC104926085,LOC103368849 coding downstream 291703 2609273 ~ 2615203 (+)
AMCG00010846 NA coding downstream 324803 2642373 ~ 2644326 (+)
AMCG00010853 NA coding downstream 413460 2731030 ~ 2732094 (+)
G102622 NA non-coding upstream 64467 2252103 ~ 2252470 (+)
G102611 NA non-coding upstream 141873 2174796 ~ 2175064 (+)
G102520 NA non-coding upstream 768757 1547810 ~ 1548180 (+)
G102518 NA non-coding upstream 798239 1518399 ~ 1518698 (+)
G102516 NA non-coding upstream 841727 1474998 ~ 1475210 (+)
G102655 NA non-coding downstream 131630 2449200 ~ 2449881 (+)
G102693 NA non-coding downstream 306036 2623606 ~ 2660858 (+)
G102843 NA non-coding downstream 709498 3027068 ~ 3027397 (+)
G102859 NA non-coding downstream 776364 3093934 ~ 3130264 (+)
G102860 NA non-coding downstream 782351 3099921 ~ 3103642 (+)
AMCG00010834 NA other upstream 243695 2070677 ~ 2073242 (+)
AMCG00010832 NA other upstream 252593 2039514 ~ 2064344 (+)
AMCG00010830 NA other upstream 352972 1945055 ~ 1963965 (+)
G102535 NA other upstream 516186 1798440 ~ 1800751 (+)
G102531 NA other upstream 525214 1790188 ~ 1791723 (+)
AMCG00010854 sh3bgrl3,LOC108273253,LOC106570239,LOC106588618,LOC105933927,LOC107580135 other downstream 438726 2756296 ~ 2762226 (+)
AMCG00010856 NA other downstream 451570 2769140 ~ 2778033 (+)
AMCG00010884 NA other downstream 984386 3301956 ~ 3310953 (+)
G102921 NA other downstream 1014014 3331584 ~ 3398506 (+)
AMCG00010886 NA other downstream 1014149 3331719 ~ 3338416 (+)

Expression


Co-expression Network