G102639


Basic Information

Item Value
gene id G102639
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 2362880 ~ 2363110 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU128166
TTGGGCGAGAGGATGGAGATGTAGTCCAGGTAGATCTGCTTGGCCCTCTCGGCGACGGTGGCCTTGCGCGTCTCAGCCTTCAGCTCCTCGCAGGCCTCCCAGAACAGCATGTTCTCGTCGCTGTGCTCGGAGCGCAGGAACTCCATGAAGACGCCGCGGCCCGAGAGGCTGTCCAGCAGCGCGTTGAAGGACAGCGCCCAGGAGGACACCTCTGTCAGGCTCAGCCGGCCC

Function

NR:

description
putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128166 True 231 lncRNA 0.65 1 2362880 2363110

Neighbor

gene id symbol gene type direction distance location
AMCG00010840 NA coding downstream 26137 2332216 ~ 2336743 (-)
AMCG00010835 oprd1a,LOC108411271,LOC107595906,LOC107732912 coding downstream 180408 2180504 ~ 2182472 (-)
AMCG00010836 NA coding downstream 182383 2143118 ~ 2180497 (-)
AMCG00010827 pkib,LOC105417165,LOC107098269,LOC107374466 coding downstream 525995 1821651 ~ 1836885 (-)
AMCG00010829 stmn1,LOC107587743,LOC104924882,LOC103040240,LOC107700727,LOC107597104 coding downstream 562120 1798219 ~ 1800760 (-)
AMCG00010839 NA coding upstream 2363 2365473 ~ 2382245 (-)
AMCG00010841 fam46ba,LOC107597110,LOC108443429,LOC107587747,LOC107734389,LOC107704962,LOC107700733 coding upstream 79117 2442227 ~ 2449554 (-)
AMCG00010842 NA coding upstream 136695 2499805 ~ 2502500 (-)
AMCG00010844 arid1a,LOC106588635 coding upstream 143610 2506720 ~ 2519791 (-)
AMCG00010845 NA coding upstream 174088 2537198 ~ 2539438 (-)
G102629 NA non-coding downstream 45616 2316765 ~ 2317264 (-)
G102623 NA non-coding downstream 110413 2252119 ~ 2252467 (-)
G102615 NA non-coding downstream 185364 2177276 ~ 2177516 (-)
G102609 NA non-coding downstream 191079 2171530 ~ 2171801 (-)
G102572 NA non-coding downstream 398927 1962282 ~ 1963953 (-)
G102651 NA non-coding upstream 23613 2386723 ~ 2437698 (-)
G102725 NA non-coding upstream 311453 2674563 ~ 2675136 (-)
G102785 NA non-coding upstream 426360 2789470 ~ 2833183 (-)
G102816 NA non-coding upstream 591650 2954760 ~ 2954975 (-)
G102834 NA non-coding upstream 627537 2990647 ~ 2991248 (-)
AMCG00010806 NA other downstream 1328006 1033830 ~ 1034874 (-)
G102434 NA other downstream 1384753 975553 ~ 978127 (-)
AMCG00010794 NA other downstream 2213051 136369 ~ 149829 (-)
AMCG00010843 NA other upstream 118764 2481874 ~ 2496446 (-)
G102762 NA other upstream 376706 2739816 ~ 2778023 (-)
G102774 NA other upstream 395368 2758478 ~ 2761264 (-)
G102902 LOC104921322 other upstream 816860 3179970 ~ 3182619 (-)
G102990 NA other upstream 957703 3320813 ~ 3419176 (-)

Expression


Co-expression Network