G102843


Basic Information

Item Value
gene id G102843
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 3027068 ~ 3027397 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU128456
tgccaactgactggaagacagcaaatgtcaaaccaatccacaagaaagggcacaaaactgagccaggaaattacagaccaatcagtctcacctgcatcacctgtaaaatgaaaaccatattcttggagatagtcaacatgggtttagacgaggcagatcatgtctttgTAATTcattggagttttttgaacacgcaactccagctgtagatcatgtgaaagcatatgatatgatatacttagatttcctaaaagcttttgataaggttccacaccaaagactgatcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128456 True 287 lncRNA 0.40 2 3027068 3027397

Neighbor

gene id symbol gene type direction distance location
AMCG00010870 NA coding upstream 18777 3004761 ~ 3008291 (+)
AMCG00010869 NA coding upstream 27965 2990631 ~ 2999103 (+)
AMCG00010863 cf191,LOC106605955,LOC105018927,LOC106592819,LOC102308631 coding upstream 37387 2984975 ~ 2989681 (+)
AMCG00010865 epb41,LOC106589039 coding upstream 115017 2902803 ~ 2912051 (+)
AMCG00010866 NA coding upstream 131744 2893018 ~ 2895324 (+)
AMCG00010876 NA coding downstream 85037 3112434 ~ 3128249 (+)
AMCG00010875 NA coding downstream 117717 3145114 ~ 3167623 (+)
AMCG00010874 zmpste24,face1,LOC107670834,LOC107654896,LOC102792402 coding downstream 145425 3172822 ~ 3179031 (+)
AMCG00010882 LOC104921322 coding downstream 152563 3179960 ~ 3182656 (+)
AMCG00010881 LOC106588497,LOC102218321,LOC107094257,LOC103154989 coding downstream 155722 3183119 ~ 3188870 (+)
G102693 NA non-coding upstream 366210 2623606 ~ 2660858 (+)
G102655 NA non-coding upstream 577187 2449200 ~ 2449881 (+)
G102628 NA non-coding upstream 709498 2316937 ~ 2317570 (+)
G102622 NA non-coding upstream 774598 2252103 ~ 2252470 (+)
G102611 NA non-coding upstream 852004 2174796 ~ 2175064 (+)
G102859 NA non-coding downstream 66537 3093934 ~ 3130264 (+)
G102860 NA non-coding downstream 72524 3099921 ~ 3103642 (+)
G102944 NA non-coding downstream 405418 3432815 ~ 3433147 (+)
G102945 NA non-coding downstream 407522 3434919 ~ 3457657 (+)
G102959 NA non-coding downstream 432465 3459862 ~ 3462503 (+)
AMCG00010856 NA other upstream 249035 2769140 ~ 2778033 (+)
AMCG00010854 sh3bgrl3,LOC108273253,LOC106570239,LOC106588618,LOC105933927,LOC107580135 other upstream 264842 2756296 ~ 2762226 (+)
AMCG00010834 NA other upstream 953826 2070677 ~ 2073242 (+)
AMCG00010832 NA other upstream 962724 2039514 ~ 2064344 (+)
AMCG00010830 NA other upstream 1063103 1945055 ~ 1963965 (+)
AMCG00010884 NA other downstream 274559 3301956 ~ 3310953 (+)
G102921 NA other downstream 304187 3331584 ~ 3398506 (+)
AMCG00010886 NA other downstream 304322 3331719 ~ 3338416 (+)
AMCG00010888 NA other downstream 393685 3421082 ~ 3428429 (+)
G102947 NA other downstream 409221 3436618 ~ 3443534 (+)

Expression


Co-expression Network