G102887


Basic Information

Item Value
gene id G102887
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 3145264 ~ 3145687 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU128510
GGATCATCCATTTACACTGCCTATCGCGATACAATACAGATGTTTGTACTCGGTGCTTAAACGTTTACAGTTCTAACCCCCCAACGGCACTGGCTgtcattgcaaaaaaaaaaaaaaactaaagccaTGCAGCCCCCCTGCTTCCTGCTCTGTCCCTCTCTCGGCCCTGCAGCActtttccctgtgtgtgtttgcaacaACATCCCGTTTTTTTCTCTCGGTTTGTTGTTACCTGGCAGAAGCGCATGCAGTAGTCCTCGGACGCGGCTACCGAGACCTCCTGCCGCCGGAGATCGGCCTCCAGCCCGCCGAAGGTGTCCAGTAAACTGTCCATTGCGATTAGAGGTTTCTCCGCGGTGTTTTGCGGCTGATCTCGCCACTCAGGCTTCGTTTCTCCCTCCCCGTCCGCCATCTTCCCTCTCGG

Function

NR:

description
PREDICTED: spore coat assembly protein ExsA-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128510 True 424 lncRNA 0.54 1 3145264 3145687

Neighbor

gene id symbol gene type direction distance location
AMCG00010880 znf593 coding downstream 1505 3141407 ~ 3143759 (-)
AMCG00010878 NA coding downstream 4055 3128252 ~ 3141209 (-)
AMCG00010877 mtfr1l coding downstream 38060 3103974 ~ 3107204 (-)
AMCG00010872 si:ch211-195b13.1,LOC108273319,LOC108411161,LOC103036792,LOC107102671,LOC108251730,LOC103473069 coding downstream 101174 3034347 ~ 3044090 (-)
AMCG00010871 NA coding downstream 113702 3012593 ~ 3031562 (-)
AMCG00010879 dylt1,dynlt1 coding upstream 22738 3168425 ~ 3171989 (-)
AMCG00010883 LOC106588496,LOC103393992 coding upstream 45134 3190821 ~ 3209564 (-)
AMCG00010891 NA coding upstream 113256 3258943 ~ 3263464 (-)
AMCG00010896 NA coding upstream 271462 3417149 ~ 3418378 (-)
AMCG00010893 NA coding upstream 296754 3442441 ~ 3450634 (-)
G102834 NA non-coding downstream 154016 2990647 ~ 2991248 (-)
G102816 NA non-coding downstream 190289 2954760 ~ 2954975 (-)
G102785 NA non-coding downstream 312081 2789470 ~ 2833183 (-)
G102725 NA non-coding downstream 470128 2674563 ~ 2675136 (-)
G102651 NA non-coding downstream 707566 2386723 ~ 2437698 (-)
G102888 NA non-coding upstream 14150 3159837 ~ 3160036 (-)
G102889 NA non-coding upstream 14896 3160583 ~ 3160897 (-)
G102890 NA non-coding upstream 15410 3161097 ~ 3161512 (-)
G102920 NA non-coding upstream 122855 3268542 ~ 3269769 (-)
G103006 NA non-coding upstream 275201 3420888 ~ 3424769 (-)
G102762 NA other downstream 367241 2739816 ~ 2778023 (-)
G102774 NA other downstream 384000 2758478 ~ 2761264 (-)
AMCG00010843 NA other downstream 648818 2481874 ~ 2496446 (-)
AMCG00010806 NA other downstream 2110390 1033830 ~ 1034874 (-)
G102434 NA other downstream 2167137 975553 ~ 978127 (-)
G102902 LOC104921322 other upstream 34283 3179970 ~ 3182619 (-)
G102990 NA other upstream 175126 3320813 ~ 3419176 (-)
AMCG00010895 NA other upstream 175689 3321376 ~ 3327559 (-)
AMCG00010901 NA other upstream 408299 3553986 ~ 3574815 (-)
G103112 NA other upstream 1024106 4169793 ~ 4185974 (-)

Expression


Co-expression Network