G102990


Basic Information

Item Value
gene id G102990
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 3320813 ~ 3419176 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU128662
NNNTGGATGTCTTTGAGTCCCATAAAGGTGACCCGTTTGACCCCACCACCAACATCAACTCAGCGGTGTCTAATGTGATCTGCAGCATTGTGTTTGGAGACCGGTTTGACTACAGCGACCCCCAGTTCCTACGACTCCAGCAACTTGTCAGCCAGAATGTTAAGCTCGCCACCTCCCCTGCGATGCGGCTGTACGACATCTCCCCTTTCCTGGGGTCCTTTCTTGCCAATTTcaagaaaatgtacagtaatacTTTAGAGAATCGGACGTTCTTCTCCAACTACTACCATAAGCACAAGGACATTGTGGATAGAAATGACCTGAGGAGCTTCATTGATGCTTTCATTGCCAAACAGCAGGACGAGaatGCTAAAAAcccaaatacttatttccatgAGATGAACATGGTGACCACTGCAGGGAACCTCTTTGCTGCAGGAACAGAAACTACATCAACCACTCTGCGCTGGGGGcttctgatgatgatgaaatacCCTCTCATACAGGAGAAGGTGCATGCTGAGATCCAAGCAGTGATTGGGAAAGAGCGCCCCCCAAGGGTGGAGGACCGAAAGGACATGCCTTACACTGACGCGGTGCTGCACGAGATCCAGAGGTTTGCTAATGTGGTCCCCATGAATCTGC
>TU128666
NNNTGGATGTCTTTGAGTCCCATAAAGGTGACCCGTTTGACCccaccattaacatcacctcaGCAGTGTCTAATGTGATCTGCACCATTGTGTTTGGAGACCGGTTTGACTACAGCAACTCCCAGTTCCTACGACTCCAGCAGCTTCTCAGCCAGAATATTAAGCTTTTCCTCTCCCCTGCGATGCAGCTGTACGAAATCTTTCCTTTCCTGGGGTCTTTTCTTGCCGATTTCAAGAAAATGTACCGTAACAATTTAGAGACTCAGACGTACTTCTCCAACTACTACCATGAGCGCAAGGACATTGTGGATAGAAACGACCTGAGGAGCTTCATTGACGCTTTCATTGCCAAACAGCATGAGGAGgaaacaaaaaacccaaatacttatttccatgAGGTGAATATGGTGTCCACTGCAGTTACTCTTTTTGAAGCAGGAACAGAAACTACATCATCCACTCTGCGCTGGGGGCTTCTGCTGCTGATGAAGTACCCTCATATACAGGAGAAGGTGCATGCTGAGATCCAAGCCGTGATTGGGAAAGAGCGCCCCCCAAGGGTGGAGGACCGCAAGGACATGCCCTACACTGATGCAGTACTGCATGAGATCCAGAGGTTTGCTAATGTGGTCCCCATGAATGTGCTACATCAGACCAAATCAGACATTGACTTCAAGGGCTACAGAATCCCCAAGG

Function

GO:

id name namespace
GO:0043627 response to estrogen biological_process
GO:0071391 cellular response to estrogen stimulus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128662 False 645 TUCP 0.49 5 3320813 3419176
TU128666 True 696 TUCP 0.47 5 3416368 3419176

Neighbor

gene id symbol gene type direction distance location
AMCG00010891 NA coding downstream 57349 3258943 ~ 3263464 (-)
AMCG00010883 LOC106588496,LOC103393992 coding downstream 111249 3190821 ~ 3209564 (-)
AMCG00010879 dylt1,dynlt1 coding downstream 148824 3168425 ~ 3171989 (-)
AMCG00010880 znf593 coding downstream 177054 3141407 ~ 3143759 (-)
AMCG00010878 NA coding downstream 179604 3128252 ~ 3141209 (-)
AMCG00010893 NA coding upstream 23265 3442441 ~ 3450634 (-)
AMCG00010894 NA coding upstream 34747 3453923 ~ 3463743 (-)
AMCG00010892 NA coding upstream 55456 3474632 ~ 3483623 (-)
AMCG00010900 NA coding upstream 66365 3485541 ~ 3495838 (-)
AMCG00010898 fam76b coding upstream 79826 3499002 ~ 3507995 (-)
G102920 NA non-coding downstream 51044 3268542 ~ 3269769 (-)
G102890 NA non-coding downstream 159301 3161097 ~ 3161512 (-)
G102889 NA non-coding downstream 159916 3160583 ~ 3160897 (-)
G102888 NA non-coding downstream 160777 3159837 ~ 3160036 (-)
G102887 NA non-coding downstream 175126 3145264 ~ 3145687 (-)
G103006 NA non-coding upstream 1712 3420888 ~ 3424769 (-)
G103050 LOC103376870 non-coding upstream 365081 3784257 ~ 3784631 (-)
G103087 NA non-coding upstream 719444 4138620 ~ 4139637 (-)
G103094 NA non-coding upstream 731323 4150499 ~ 4150917 (-)
G103095 NA non-coding upstream 733342 4152518 ~ 4152748 (-)
G102902 LOC104921322 other downstream 138194 3179970 ~ 3182619 (-)
G102762 NA other downstream 542790 2739816 ~ 2778023 (-)
G102774 NA other downstream 559549 2758478 ~ 2761264 (-)
AMCG00010843 NA other downstream 824367 2481874 ~ 2496446 (-)
AMCG00010806 NA other downstream 2285939 1033830 ~ 1034874 (-)
AMCG00010901 NA other upstream 134810 3553986 ~ 3574815 (-)
G103112 NA other upstream 750617 4169793 ~ 4185974 (-)
AMCG00010925 srsf10,LOC108426370,LOC101486875 other upstream 1223476 4642652 ~ 4650406 (-)
AMCG00010937 NA other upstream 1696539 5115715 ~ 5129141 (-)
AMCG00010939 NA other upstream 1714877 5134053 ~ 5140509 (-)

Expression


Co-expression Network