G103006


Basic Information

Item Value
gene id G103006
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 3420888 ~ 3424769 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU128685
TGTACGAAACATTTTCACATCCATTTATATTGAATCAACTGCCTCTCGCGAAGATATCAGAACATACGAGCTTTGCACCACattcttctcctctctcccaaACCTGAACACTCACCTGACATAAAGTTTCATGAGGTTTCTTCAAGTCCAGAATATTGAGGTTCCCGATCACAGGCCAGGCAGCCGGGCCGGGGGGGAACCTGTACACAGATGACTTGGATGGTTTGAAGAGAAAGTAGAAGAAGAAGGCTGTTGTTAAAATGAAGACCAGAGACACTGTGACAGTGTTCGCCAGCAGCACTGCGATCAGAGACATGTTTCCTTGGAGAGTTCCTCTTTGCCTATAGCTACACCTATACTCCTTCACCTGCTTATATACAGAGCTTAACCATTGTCTTGTACCTAGATCAATTGCTGGTTGTGTCCTTCTCCCTTTGCACACTAAGGCAGAGGTTACTACTGTGTGCCAAAGTATTCACAGATCGAATAATGCCTAAACCTTAAAACCAC

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides molecular_function

KEGG:

id description
ko00982 Drug metabolism - cytochrome P450
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU128685 True 510 lncRNA 0.45 2 3420888 3424769

Neighbor

gene id symbol gene type direction distance location
AMCG00010896 NA coding downstream 2510 3417149 ~ 3418378 (-)
AMCG00010891 NA coding downstream 157424 3258943 ~ 3263464 (-)
AMCG00010883 LOC106588496,LOC103393992 coding downstream 211324 3190821 ~ 3209564 (-)
AMCG00010879 dylt1,dynlt1 coding downstream 248899 3168425 ~ 3171989 (-)
AMCG00010880 znf593 coding downstream 277129 3141407 ~ 3143759 (-)
AMCG00010893 NA coding upstream 17672 3442441 ~ 3450634 (-)
AMCG00010894 NA coding upstream 29154 3453923 ~ 3463743 (-)
AMCG00010892 NA coding upstream 49863 3474632 ~ 3483623 (-)
AMCG00010900 NA coding upstream 60772 3485541 ~ 3495838 (-)
AMCG00010898 fam76b coding upstream 74233 3499002 ~ 3507995 (-)
G102920 NA non-coding downstream 151119 3268542 ~ 3269769 (-)
G102890 NA non-coding downstream 259376 3161097 ~ 3161512 (-)
G102889 NA non-coding downstream 259991 3160583 ~ 3160897 (-)
G102888 NA non-coding downstream 260852 3159837 ~ 3160036 (-)
G102887 NA non-coding downstream 275201 3145264 ~ 3145687 (-)
G103050 LOC103376870 non-coding upstream 359488 3784257 ~ 3784631 (-)
G103087 NA non-coding upstream 713851 4138620 ~ 4139637 (-)
G103094 NA non-coding upstream 725730 4150499 ~ 4150917 (-)
G103095 NA non-coding upstream 727749 4152518 ~ 4152748 (-)
G103149 NA non-coding upstream 1000585 4425354 ~ 4425572 (-)
G102990 NA other downstream 1712 3320813 ~ 3419176 (-)
AMCG00010895 NA other downstream 93329 3321376 ~ 3327559 (-)
G102902 LOC104921322 other downstream 238269 3179970 ~ 3182619 (-)
G102762 NA other downstream 642865 2739816 ~ 2778023 (-)
G102774 NA other downstream 659624 2758478 ~ 2761264 (-)
AMCG00010901 NA other upstream 129217 3553986 ~ 3574815 (-)
G103112 NA other upstream 745024 4169793 ~ 4185974 (-)
AMCG00010925 srsf10,LOC108426370,LOC101486875 other upstream 1217883 4642652 ~ 4650406 (-)
AMCG00010937 NA other upstream 1690946 5115715 ~ 5129141 (-)
AMCG00010939 NA other upstream 1709284 5134053 ~ 5140509 (-)

Expression


Co-expression Network