G103309


Basic Information

Item Value
gene id G103309
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 5331732 ~ 5334257 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU129054
atatatttatattatacacacatttaaccACTAGATGGAGATATTAGTCTAGTTGattgttactttttaatgtCCCTTTAGCTTCgttttccatttgaaattcaTTCAAACTTGACAgctgttttttggttgttgtttttttacccgTTCACTTCAATTCATAGCTTTATTCATTCCCTATGCCAACAGACAGAAAAGTAACCTTCGGTGTCTGAATAGAGAAACACAACTGTCAATGCTCACCGTACCGTTTGGTagagaaaaagcaaaaagctTCACGAACAGTATATTCTGCATGTAATTGTAATGTCTTGTTGTAAACGCTGGTTTGAAATCATTATCGGGTATTTTAGTGCTGTGATGTAACTGTCTTTATTTCCAAGCCTGCAGACTGAGGGAAGCTCCTGCCGGGCTCCCTGGCTTTACCGGCGGCCCAGTAGAACCAGCTGGTAACCAGGATTTCTTTGTTTATATCAGGGTGTGGATGTgcagtgtttttatatacatttctatataataataacactgtggTTCAGTGGCAGCTAGGTTACTTTTGAAGTTTTAACCTCGTTGGGAAAagctttaaagaagaaaaattgaaaggaatatcttgtacattttgtatatttgttttgcaattgtaaatagtattttgtgattgattttgtttttgttattgaaagGAAAACTCGTGTTTTTATAAGCTATGTTTCTGTGAATTGGATTTgggcgtgtgcgtgtgcgtgtgtgaaaaTACTGTAGATCCTTCCTGGCAAGGTGATTGAAAATCCTAACAGCACAAAGACGACTCGGCTGAGTTTTCTGCTCGGCTGTTGCACTGTGTTTCATCATGTGTTGAAAATGAAAGGTCTTTGGGGAATTTCTCTTCCATTTCAAAACTTGCGGCATTACCAATGGAAATCCTCACTGTGAGGTCTGAAACCACACTATAGAAACCAATAGCATTAGGATGTCTTTACATACGACTGGACTTCCAGAATTCtcttctattctattctatttttttttgcGGAATTATGATGAGACTTAATATATCAAAccacaaaatctgtttttttatatatatatatatattaatttccaCCATCTGAAACCAAATGGCCTTTAAAAATGGAAAGTATTGGCAACGGTAAATACTGTTGTTGGTTTCGAGGGGGGCAGGATTGCTAAGGTTGATCTCTGATCGTACAGGATCATCCTGAGATGACACGGCAGGCTTCACAGATGTGGGTAATTGCTGGGGGTTGACGGTATTCCAGACCCTGCTTTGCTGATGCTTTTTGTCTCCTTTCCCACTTCCTGAACGACGGGAAACGCATTGTGGCAGGTTGATGCCCTAATATTTTGACTGCAAATGTAATTAGGCTCACCTGTCACACATAAATGCCCCCCCTCTGATCCAGTCCTGCTTGGTAAAAACCTTGGAGTCACTCAAAGCGGCAACGCCGAGTCTTTGAGGTCAAACTCCAGGTTTGTTTTGGTCTCTGATTAGACTGCAGTGTTTAGCTTTAAGCCATTCCAGGTGCCAGTCAAATCATTTACAGAAGCTGATCAGTCTTggattgtgtttgattttgtaGGTTTAATGTTCAAGTAAAACCTTCAGTTTCTATGACGGGGGAACAATGGAACCCTTATACCCCCACCCTTCTCTCATTATATACCATCGGCAACGTTTGCCTGCATTCAGGAGATCAGACTGTGAATCCCTCAGGTCTGGTACTTTCTTCCAAAATGTGTTCATAATGTCggcatttgttttatatcacTCTGTGAAACGTAACAATATTTTTGATTCAGATCATGACCCCTCCACTAAATCGACATCATCCGCAAATTGATACAAGACAGAAATCCAattaaggaaaatgttttacagttttagtTGACTAAACTAAGACAGACACTTAAACTCTGTCCTTGGACCAAATGCAGAGCTAAACTTTTAGACAATGTCTTTGTTAGATCCACAGACTGAACTTCTGTAAATCCCAAACTAAGCGGACACTAGTCCGTTTTACATGACTGGGGACCTAGATTGGCTTTCCGTCTGTGTGAATGAAACCTACTTTGCCTTGAGCCCAGTGGCTAAGAGAATGGGACTAAATTGGCCTCTGACCAGaaaatggtaaattaaattTAGCACAACTTTCACATTGTACTGTACGTGACAGACTATGAATTCCACGGTCCTGAAGGAACATATGTCATTTTTAGTGTGTGTGATgagaaaaggtgtttttttgtttttgtttccatttgcttatttttagtaGCTTTAATAAACCCTTTGTAAAATTGTAcagaattttgtatttattaaagagATTTTTGTTCTTAGTATTTGTAGTGAAAGATGTCGTTTGCCCTCTTTTGTAATACtagtgatatttttttaaagaatgactGTATATCAAAACATGTGGCACTTActaatgttatgttttattttttgctcttgtaaaatgttgaaataaagtACTGAAGCCATGAATTTGAACCTGG

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component

KEGG:

id description
ko03030 DNA replication
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU129054 True 2526 lncRNA 0.38 1 5331732 5334257

Neighbor

gene id symbol gene type direction distance location
AMCG00010944 NA coding downstream 128101 5175899 ~ 5203631 (-)
AMCG00010938 dhdds,LOC107564097,LOC104959484,LOC104959477 coding downstream 182471 5141224 ~ 5149261 (-)
AMCG00010940 NA coding downstream 228335 5096591 ~ 5103397 (-)
AMCG00010934 LOC106605147,LOC101067841 coding downstream 301202 5002886 ~ 5030530 (-)
AMCG00010931 NA coding downstream 350279 4978936 ~ 4981453 (-)
AMCG00010947 NA coding upstream 1589 5335846 ~ 5347367 (-)
AMCG00010945 id3 coding upstream 19686 5353943 ~ 5355562 (-)
AMCG00010948 NA coding upstream 39602 5373859 ~ 5383129 (-)
AMCG00010949 NA coding upstream 66032 5400289 ~ 5410795 (-)
AMCG00010950 NA coding upstream 81275 5415532 ~ 5431128 (-)
G103149 NA non-coding downstream 906160 4425354 ~ 4425572 (-)
G103095 NA non-coding downstream 1178984 4152518 ~ 4152748 (-)
G103094 NA non-coding downstream 1180815 4150499 ~ 4150917 (-)
G103087 NA non-coding downstream 1192095 4138620 ~ 4139637 (-)
G103050 LOC103376870 non-coding downstream 1547101 3784257 ~ 3784631 (-)
G103329 NA non-coding upstream 25718 5359975 ~ 5378226 (-)
G103362 NA non-coding upstream 224420 5558677 ~ 5615853 (-)
G103473 NA non-coding upstream 1050224 6384481 ~ 6386604 (-)
G103503 NA non-coding upstream 1179606 6513863 ~ 6514123 (-)
G103539 NA non-coding upstream 1289824 6624081 ~ 6627452 (-)
AMCG00010946 NA other downstream 6308 5284330 ~ 5325424 (-)
AMCG00010939 NA other downstream 191223 5134053 ~ 5140509 (-)
AMCG00010937 NA other downstream 202591 5115715 ~ 5129141 (-)
AMCG00010925 srsf10,LOC108426370,LOC101486875 other downstream 681326 4642652 ~ 4650406 (-)
G103112 NA other downstream 1145758 4169793 ~ 4185974 (-)
G103395 NA other upstream 370513 5704770 ~ 5748564 (-)
AMCG00010966 NA other upstream 630876 5965133 ~ 5974307 (-)
AMCG00010988 NA other upstream 1294313 6628570 ~ 6644723 (-)
G103832 NA other upstream 2603880 7938137 ~ 8027031 (-)
AMCG00011051 NA other upstream 3485294 8819551 ~ 8864051 (-)

Expression


Co-expression Network