G103541


Basic Information

Item Value
gene id G103541
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 6636963 ~ 6637188 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU129372
ATGAGGACCTCCTTCCTCTCCAGGATGTTTTTCTGTGGGAGCTGGGCGGCAGAGCTGCCTGTGTCGATGGTGTTGCCCAGGAGATCTGGCTCCATCTTGTCTGTGGGGGTTTTAGGTTTGTCCCTGGGGACTTCGTTGTTGGTTTCCTCCTCTCGGATCTCGAAATCACCGCTATTCCCAGCCCCACCTACCTCGTTATTGAGGGTCTCTTCTGGTGTCTGAGtct

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU129372 True 226 lncRNA 0.55 1 6636963 6637188

Neighbor

gene id symbol gene type direction distance location
AMCG00010981 NA coding upstream 127001 6493616 ~ 6509962 (+)
AMCG00010974 NA coding upstream 225167 6408918 ~ 6411796 (+)
AMCG00010969 kdm1a coding upstream 585296 6035491 ~ 6051667 (+)
AMCG00010964 NA coding upstream 649283 5977850 ~ 5987680 (+)
AMCG00010967 NA coding upstream 659148 5977080 ~ 5977815 (+)
AMCG00010986 fabp3,LOC108426441,LOC105892250,LOC107669374 coding downstream 117736 6754924 ~ 6762123 (+)
AMCG00010989 snrnp40,LOC107593559,LOC106588762 coding downstream 138376 6775564 ~ 6782856 (+)
AMCG00010991 nkain1,LOC106570599,LOC107593567 coding downstream 234635 6871823 ~ 6881274 (+)
AMCG00010993 NA coding downstream 366895 7004083 ~ 7022923 (+)
AMCG00010995 NA coding downstream 470097 7107285 ~ 7110941 (+)
G103540 NA non-coding upstream 6973 6628488 ~ 6629990 (+)
G103538 NA non-coding upstream 9525 6623485 ~ 6627438 (+)
G103501 NA non-coding upstream 123145 6513312 ~ 6513818 (+)
G103470 rpl13a,LOC107720993 non-coding upstream 232660 6400638 ~ 6404303 (+)
G103463 NA non-coding upstream 381425 6255224 ~ 6255538 (+)
G103567 ppce,LOC107688393,LOC106923076,LOC103154994,LOC107592053,LOC107706142,LOC107654745,LOC106588491 non-coding downstream 269914 6907102 ~ 6927247 (+)
G103599 NA non-coding downstream 324798 6961986 ~ 6962191 (+)
G103670 NA non-coding downstream 671417 7308605 ~ 7309609 (+)
G103684 NA non-coding downstream 736487 7373675 ~ 7384727 (+)
G103688 NA non-coding downstream 752814 7390002 ~ 7452292 (+)
AMCG00010979 NA other upstream 241479 6387036 ~ 6395484 (+)
AMCG00010922 NA other upstream 1994560 4634472 ~ 4642403 (+)
G103078 NA other upstream 2553377 4049938 ~ 4083586 (+)
G103030 NA other upstream 3056686 3577235 ~ 3580277 (+)
G102947 NA other upstream 3193429 3436618 ~ 3443534 (+)
G103542 NA other downstream 4795 6641983 ~ 6642628 (+)
AMCG00010990 pum1 other downstream 255209 6892397 ~ 6920931 (+)
AMCG00010994 NA other downstream 434245 7071433 ~ 7103508 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 1911175 8548363 ~ 8552605 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 2893286 9530474 ~ 9549520 (+)

Expression


Co-expression Network