G103567 (ppce,LOC107688393,LOC106923076,LOC103154994,LOC107592053,LOC107706142,LOC107654745,LOC106588491)


Basic Information

Item Value
gene id G103567
gene name ppce,LOC107688393,LOC106923076,LOC103154994,LOC107592053,LOC107706142,LOC107654745,LOC106588491
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 6907102 ~ 6927247 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU129412
tttttttttttttttTCATCAAtgattgcattcatttattacAGTAGGTGTAAATCATGATCTAAAACACCAGACAATTCAATACATGGACATCTGCTGGTTGAAAATGTGTCTACTGTTTATCTGACTGATAaactggttgtgtgtgtgtgtgtgtgtgtgtggggttcAGTCCTGCCTGCGTGACTCTCAAAGAGTCCTCTCTCCCGGAGgggttttctgtgtgtgtgtgtgcttgtgtgcttGAAAGATTGTATCCTCTGCTTGTGGGGTTCAGAATGGCTGTGAGGCCGGTCACAAActgtctgctgtgtgtttaGATTTTCAATACTCATAAATTCCCCAACTGTACACAAGCTCCCTAATTAAACTCATTATAGGTTTAATTATACCAATTTCCCCACAATTCCCAATTCTTAAGGTGCTGATGATCGAGGGAGAGCTAGAAAGACTGCTGGATTTTATTCCTCCTGCATCAGAGATGTCCAAAGAATCCTGTTGCTTGACAATCCCTTGTggaacaaacatatttttaatatactgtagaTTTATAATCCTTAAACTTTTTAGAGAATATAACTGGACCAttgaaagtatatttaaaatatatgggctatatttaaaatatgtatttgtttctttaggttcatttaatgtaaaatggaTATATgaattacagactaaaatatattttaaatgtattcactttaAACATTGGTCATCtatcatatattataaatatatgtttgttccATATGGGATATGATGAATTTAATATGTTATAAGCAGTTTGGCATTGTCAAACCATACTGAGTGAGCAAGCAAATATAATTTTTAGTACCAGACTAAGAACTGTGCCTCTCGGTCAACAACCCTAACATTAGTAAATTAATACACACCAACTAAAATAAGATAATATTTACCAACTAGTGTcgggaaaaacacaaaatggccTTAATTGCTCTGCGATAGGATTCTAAATATTACCATCCCTGCCagtctgtctgtcctgtgacTCTGAAATCAAccagccccctctctctctctccctccctccatctctccctctgcctcagTCAATCCAGTTCAGTTTCAGGGTCTCTGCGATGAAAGAGAAGATGTGCGTGTCCTCGAGGATGGCCTTAGCGGTGGGTTTGCCTGCCCCGTGGCCGCTCTTGGTGTCGATGCGGATTAAGAGAGGCTGGCGCTGCTGAGGGCTGGCCCCCACGCCGTGCTGCAGGGTCGCGATGTACTTGAGGGAGTGCAGGGGAACAACACGGTCGTCGTGGTCCGCCGTCAGCAGCAGCATGGCCGGGTACTTGAGGTGCTGGGCGGGAGCAGAGGGCAGGTTGTGCAGGGGGGAGTACCTGAAGGGAACACACAGAAGCCCATCAGACATCAGGGAGCACCAACATTTAAACAGCAATGCTCTGACAGAAGAGGGAATTGCATATCCCAGAATCTTCATTAGAAGCATGGGTAATCTGTCTA

Function

NR:

description
PREDICTED: prolyl endopeptidase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129412 True 1491 lncRNA 0.42 2 6907102 6927247

Neighbor

gene id symbol gene type direction distance location
AMCG00010991 nkain1,LOC106570599,LOC107593567 coding upstream 25828 6871823 ~ 6881274 (+)
AMCG00010989 snrnp40,LOC107593559,LOC106588762 coding upstream 124246 6775564 ~ 6782856 (+)
AMCG00010986 fabp3,LOC108426441,LOC105892250,LOC107669374 coding upstream 144979 6754924 ~ 6762123 (+)
AMCG00010981 NA coding upstream 397140 6493616 ~ 6509962 (+)
AMCG00010974 NA coding upstream 495306 6408918 ~ 6411796 (+)
AMCG00010993 NA coding downstream 76836 7004083 ~ 7022923 (+)
AMCG00010995 NA coding downstream 180038 7107285 ~ 7110941 (+)
AMCG00010996 ppp1r8a,LOC105012537,LOC108441741,LOC105903676,LOC108272406 coding downstream 217492 7144739 ~ 7148896 (+)
AMCG00010998 NA coding downstream 230243 7157490 ~ 7165268 (+)
AMCG00011001 med18,LOC106605104 coding downstream 262974 7190221 ~ 7199316 (+)
G103541 NA non-coding upstream 269914 6636963 ~ 6637188 (+)
G103540 NA non-coding upstream 277112 6628488 ~ 6629990 (+)
G103538 NA non-coding upstream 279664 6623485 ~ 6627438 (+)
G103501 NA non-coding upstream 393284 6513312 ~ 6513818 (+)
G103470 rpl13a,LOC107720993 non-coding upstream 502799 6400638 ~ 6404303 (+)
G103599 NA non-coding downstream 34739 6961986 ~ 6962191 (+)
G103670 NA non-coding downstream 381358 7308605 ~ 7309609 (+)
G103684 NA non-coding downstream 446428 7373675 ~ 7384727 (+)
G103688 NA non-coding downstream 462755 7390002 ~ 7452292 (+)
G103678 NA non-coding downstream 468381 7395628 ~ 7398120 (+)
G103542 NA other upstream 264474 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 511618 6387036 ~ 6395484 (+)
AMCG00010922 NA other upstream 2264699 4634472 ~ 4642403 (+)
G103078 NA other upstream 2823516 4049938 ~ 4083586 (+)
G103030 NA other upstream 3326825 3577235 ~ 3580277 (+)
AMCG00010994 NA other downstream 144186 7071433 ~ 7103508 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 1621116 8548363 ~ 8552605 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 2603227 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 3276370 10203617 ~ 10271863 (+)
G104273 NA other downstream 3891441 10818688 ~ 10819423 (+)

Expression


Co-expression Network