G103900


Basic Information

Item Value
gene id G103900
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 8341363 ~ 8341588 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU129846
CGTACACTGGAGCATATTGAGTTGTACAATCGAGGAGCTTCAAGTAAACTTCTAAATCTTATTTacttaacaataataaaagactGATCTCCAGCTAATGGTTTATTATGTTGGATGTTCATAAAAACATGCTTGGATGTAGGTCAGGTAGGTGACCAGCAGATGTTTCTCAGCTTCCTGCTGCCACACAATCCTTGGCCTTCTTGCAATCACCAGCAAAGGGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129846 True 226 lncRNA 0.41 1 8341363 8341588

Neighbor

gene id symbol gene type direction distance location
AMCG00011031 NA coding downstream 12421 8328395 ~ 8328942 (-)
AMCG00011030 tmem39b coding downstream 192202 8133029 ~ 8149161 (-)
AMCG00011027 kpna6,LOC107584279,LOC107745716,LOC107562870 coding downstream 220871 8109323 ~ 8120492 (-)
AMCG00011025 LOC107562872,LOC107687085,LOC107576061 coding downstream 241748 8090961 ~ 8099615 (-)
AMCG00011024 ccdc28b,LOC103357048,LOC102215669,LOC106535222 coding downstream 251288 8082418 ~ 8090075 (-)
AMCG00011035 LOC106581236,LOC100380864 coding upstream 23132 8364720 ~ 8380701 (-)
AMCG00011036 zbtb8os,LOC100304789 coding upstream 101727 8443315 ~ 8452241 (-)
AMCG00011034 NA coding upstream 121626 8463214 ~ 8464498 (-)
AMCG00011041 yars,LOC107687080,LOC107724337,LOC107691530 coding upstream 207245 8548833 ~ 8555531 (-)
AMCG00011040 NA coding upstream 237043 8578631 ~ 8582714 (-)
G103893 NA non-coding downstream 173439 8167695 ~ 8167924 (-)
G103859 NA non-coding downstream 284680 8056481 ~ 8056683 (-)
G103794 NA non-coding downstream 561422 7777008 ~ 7779941 (-)
G103666 NA non-coding downstream 1108049 7230954 ~ 7233314 (-)
G103658 NA non-coding downstream 1151780 7189085 ~ 7189583 (-)
G103903 NA non-coding upstream 996 8342584 ~ 8342818 (-)
G103929 NA non-coding upstream 119342 8460930 ~ 8462662 (-)
G103999 NA non-coding upstream 464882 8806470 ~ 8811022 (-)
G104054 NA non-coding upstream 623129 8964717 ~ 8965281 (-)
G104055 NA non-coding upstream 623784 8965372 ~ 8965579 (-)
G103832 NA other downstream 314332 7938137 ~ 8027031 (-)
AMCG00010988 NA other downstream 1696640 6628570 ~ 6644723 (-)
AMCG00010966 NA other downstream 2367056 5965133 ~ 5974307 (-)
G103395 NA other downstream 2592799 5704770 ~ 5748564 (-)
AMCG00010946 NA other downstream 3015939 5284330 ~ 5325424 (-)
AMCG00011051 NA other upstream 477963 8819551 ~ 8864051 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other upstream 880680 9222268 ~ 9236228 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 1259789 9601377 ~ 9619279 (-)
AMCG00011086 NA other upstream 1399545 9741133 ~ 9743785 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 3617650 11959238 ~ 11971002 (-)

Expression


Co-expression Network