G104054


Basic Information

Item Value
gene id G104054
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 8964717 ~ 8965281 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130051
GTGCCACAGCCGGAATCAGACGCCTTGTTTTAATAGAATTTGTTTTGAAGGGATCTTTGCACGTCTGAAACACGTTTTAAATTACCCTAGACGTCAGTGACTCAATACTGTCTTGTGAGCACTGTACCCTGGgaataaaatgttcatttgatGTTACAAGTTGTAATGGTGACCATATTCACTGTGGTGCTGAATCTGGAAGTGGAAGTGCGTGTCATGTCGagtttttggtttttgtatttgttttggtttctgtgATGTGGGAAATGATACGCAGGTCTCTCTTGCTGCTCGCAGGTGAATCTCCTGCTCCTTCTCCTTCCACACCTGTTTCCCTTCTAGCTATACACTGACCCTAACAGATTCCATTACATTGTCAGAGACCACAAGAAAGCAGATGCCAATTTTATTCTAGAATAACTGCCTCCCAGAGCGAGTTGCTCTTGACAGATATTTTCATGTGACATTCAATAGAATGTTAATaaaaaagatttacattttgtataatttatatatatgtgggACGTTTCTTCACATGAGCAATAAGCTGTGGGTTAACTCCGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130051 True 565 lncRNA 0.40 1 8964717 8965281

Neighbor

gene id symbol gene type direction distance location
AMCG00011052 NA coding downstream 11968 8941116 ~ 8952749 (-)
AMCG00011050 tmem57,tmem57a,LOC106610893,LOC107584286,LOC107687072 coding downstream 34119 8913441 ~ 8930598 (-)
AMCG00011049 ldlrap1,arhb,LOC106579967 coding downstream 78012 8866341 ~ 8886705 (-)
AMCG00011046 LOC106589091,LOC103035846,LOC105892259,LOC103143294,LOC108257369,LOC105006285,LOC107691525 coding downstream 229134 8721384 ~ 8735583 (-)
AMCG00011042 NA coding downstream 354465 8587593 ~ 8610252 (-)
AMCG00011054 NA coding upstream 536 8965817 ~ 8970772 (-)
AMCG00011057 clic4 coding upstream 222429 9187710 ~ 9200667 (-)
AMCG00011059 NA coding upstream 274080 9239361 ~ 9249868 (-)
AMCG00011060 rcan3,LOC104955544 coding upstream 288852 9254133 ~ 9260814 (-)
AMCG00011061 NA coding upstream 334716 9299997 ~ 9309271 (-)
G103999 NA non-coding downstream 153695 8806470 ~ 8811022 (-)
G103929 NA non-coding downstream 502055 8460930 ~ 8462662 (-)
G103903 NA non-coding downstream 621899 8342584 ~ 8342818 (-)
G103900 NA non-coding downstream 623129 8341363 ~ 8341588 (-)
G103893 NA non-coding downstream 796793 8167695 ~ 8167924 (-)
G104055 NA non-coding upstream 91 8965372 ~ 8965579 (-)
G104098 NA non-coding upstream 272510 9237791 ~ 9265487 (-)
G104126 NA non-coding upstream 445308 9410589 ~ 9412922 (-)
G104272 NA non-coding upstream 1758309 10723590 ~ 10723956 (-)
G104278 NA non-coding upstream 1980720 10946001 ~ 10946274 (-)
AMCG00011051 NA other downstream 100666 8819551 ~ 8864051 (-)
G103832 NA other downstream 937686 7938137 ~ 8027031 (-)
AMCG00010988 NA other downstream 2319994 6628570 ~ 6644723 (-)
AMCG00010966 NA other downstream 2990410 5965133 ~ 5974307 (-)
G103395 NA other downstream 3216153 5704770 ~ 5748564 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other upstream 256987 9222268 ~ 9236228 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 636096 9601377 ~ 9619279 (-)
AMCG00011086 NA other upstream 775852 9741133 ~ 9743785 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 2993957 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 3025548 11990829 ~ 11997786 (-)

Expression


Co-expression Network