G104055


Basic Information

Item Value
gene id G104055
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 8965372 ~ 8965579 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130052
tttatttataatatgaagCCAATGGTTTTTTAAGAAGGCTTGGCTTAGATTTTCAGTTTGAGCAGGAGTAACAAGTTACATATTCATCCGATCCTAGAAATCTCAGTTTTTGTTAATTGGCTAGAAGTGAAGTGAGAAAAGACTTGTGAGCCGAGAAACCAAGTTTAGTGAGGTGATTTAATTCCACTGCACTCTCATTCCATGCggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130052 True 208 lncRNA 0.37 1 8965372 8965579

Neighbor

gene id symbol gene type direction distance location
AMCG00011052 NA coding downstream 12623 8941116 ~ 8952749 (-)
AMCG00011050 tmem57,tmem57a,LOC106610893,LOC107584286,LOC107687072 coding downstream 34774 8913441 ~ 8930598 (-)
AMCG00011049 ldlrap1,arhb,LOC106579967 coding downstream 78667 8866341 ~ 8886705 (-)
AMCG00011046 LOC106589091,LOC103035846,LOC105892259,LOC103143294,LOC108257369,LOC105006285,LOC107691525 coding downstream 229789 8721384 ~ 8735583 (-)
AMCG00011042 NA coding downstream 355120 8587593 ~ 8610252 (-)
AMCG00011054 NA coding upstream 238 8965817 ~ 8970772 (-)
AMCG00011057 clic4 coding upstream 222131 9187710 ~ 9200667 (-)
AMCG00011059 NA coding upstream 273782 9239361 ~ 9249868 (-)
AMCG00011060 rcan3,LOC104955544 coding upstream 288554 9254133 ~ 9260814 (-)
AMCG00011061 NA coding upstream 334418 9299997 ~ 9309271 (-)
G104054 NA non-coding downstream 91 8964717 ~ 8965281 (-)
G103999 NA non-coding downstream 154350 8806470 ~ 8811022 (-)
G103929 NA non-coding downstream 502710 8460930 ~ 8462662 (-)
G103903 NA non-coding downstream 622554 8342584 ~ 8342818 (-)
G103900 NA non-coding downstream 623784 8341363 ~ 8341588 (-)
G104098 NA non-coding upstream 272212 9237791 ~ 9265487 (-)
G104126 NA non-coding upstream 445010 9410589 ~ 9412922 (-)
G104272 NA non-coding upstream 1758011 10723590 ~ 10723956 (-)
G104278 NA non-coding upstream 1980422 10946001 ~ 10946274 (-)
G104315 NA non-coding upstream 2450611 11416190 ~ 11420103 (-)
AMCG00011051 NA other downstream 101321 8819551 ~ 8864051 (-)
G103832 NA other downstream 938341 7938137 ~ 8027031 (-)
AMCG00010988 NA other downstream 2320649 6628570 ~ 6644723 (-)
AMCG00010966 NA other downstream 2991065 5965133 ~ 5974307 (-)
G103395 NA other downstream 3216808 5704770 ~ 5748564 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other upstream 256689 9222268 ~ 9236228 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 635798 9601377 ~ 9619279 (-)
AMCG00011086 NA other upstream 775554 9741133 ~ 9743785 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 2993659 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 3025250 11990829 ~ 11997786 (-)

Expression


Co-expression Network