G104221


Basic Information

Item Value
gene id G104221
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 9872653 ~ 9872890 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130278
cctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacacttcttcacacagagagttgtcacaatctgaacaaactccccagcgatgtgggtgaagctgaaaatttgg

Function

NR:

description
PREDICTED: carboxypeptidase Y-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130278 True 238 lncRNA 0.48 1 9872653 9872890

Neighbor

gene id symbol gene type direction distance location
AMCG00011082 NA coding upstream 140210 9723810 ~ 9732443 (+)
AMCG00011079 NA coding upstream 280466 9591072 ~ 9592187 (+)
AMCG00011080 gale,LOC107583591,LOC107721820 coding upstream 290908 9575129 ~ 9581745 (+)
AMCG00011081 hmgcl,LOC106610807,LOC106578367 coding upstream 297949 9566520 ~ 9574704 (+)
AMCG00011075 NA coding upstream 315266 9551804 ~ 9557387 (+)
AMCG00011087 csmd2,LOC106957799,LOC103363662 coding downstream 145672 10018562 ~ 10018933 (+)
AMCG00011088 csmd2,LOC107712626,LOC107698986,LOC107663732,LOC107757197 coding downstream 200832 10073722 ~ 10087704 (+)
AMCG00011090 csmd2 coding downstream 266571 10139461 ~ 10192241 (+)
AMCG00011091 trappc3,LOC107653823,LOC107564495 coding downstream 625587 10498477 ~ 10503466 (+)
AMCG00011095 NA coding downstream 728590 10601480 ~ 10603114 (+)
G104204 NA non-coding upstream 125789 9693144 ~ 9746864 (+)
G104150 pabpc4,LOC107721216,LOC107659242 non-coding upstream 390979 9477567 ~ 9481674 (+)
G104147 NA non-coding upstream 396810 9474174 ~ 9475843 (+)
G104115 NA non-coding upstream 520066 9352373 ~ 9352587 (+)
G104079 NA non-coding upstream 646475 9223185 ~ 9226178 (+)
G104255 NA non-coding downstream 682839 10555729 ~ 10617196 (+)
G104271 NA non-coding downstream 850660 10723550 ~ 10723890 (+)
G104307 col9a2 non-coding downstream 1499664 11372554 ~ 11377085 (+)
G104310 NA non-coding downstream 1545776 11418666 ~ 11420066 (+)
G104326 NA non-coding downstream 1660030 11532920 ~ 11593994 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other upstream 323133 9530474 ~ 9549520 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 1320048 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 2769145 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 2951722 6892397 ~ 6920931 (+)
G103542 NA other upstream 3230025 6641983 ~ 6642628 (+)
AMCG00011089 csmd2 other downstream 330727 10203617 ~ 10271863 (+)
G104273 NA other downstream 945798 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 1771127 11644017 ~ 11651021 (+)
G104382 NA other downstream 1793308 11666198 ~ 11671340 (+)
AMCG00011115 NA other downstream 1935956 11808846 ~ 11810822 (+)

Expression


Co-expression Network