G104273


Basic Information

Item Value
gene id G104273
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 10818688 ~ 10819423 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130349
tatacagtgagggaaaaaagtatttgatcccctgctgattttgtacgtttgcccactgacaaagaaatgatcagtctacaattttaatggtaggtgtattttaacagtgagagacagaataacaacaaaaaaatccagaaaaacgcatttcaaaaaagttataaattgatttgcatgttaatgagggaaataagtatttgatcccctatcaatcagcaagatttatggctcccaggtgtcttttatacaggtaacgagctgcgTTTAGGAGCagtctcttaaagggagtgctcctaatctcggctcgttacctgtataaaagacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacaaaaggctggaatgggctacaggaccatcgccaagcagcttggtaagaaggtgacaacagttggtgtgattattcgcaaatggaagaaacaaaataactgtcagtctccctcggtctggggctccatgcaagatctcacctcgtggagtttcaataatcatgagaacggtgaggaatcagcccagaactaaggcagctgggactatagtcaccaagaaaacaattggtgaCACACTACGcagtgaaggactgaaatcctgcagcgcccgcaaggtccccctgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130349 True 709 TUCP 0.43 2 10818688 10819423

Neighbor

gene id symbol gene type direction distance location
AMCG00011094 tp4a2,ptp4a2,LOC107564493,LOC107653869,LOC107670276,LOC107710550,LOC105012508 coding upstream 167261 10640780 ~ 10651427 (+)
AMCG00011093 col8a2,LOC106570550,LOC107724334,LOC107565043 coding upstream 207806 10608957 ~ 10610882 (+)
AMCG00011095 NA coding upstream 215574 10601480 ~ 10603114 (+)
AMCG00011091 trappc3,LOC107653823,LOC107564495 coding upstream 315222 10498477 ~ 10503466 (+)
AMCG00011090 csmd2 coding upstream 626447 10139461 ~ 10192241 (+)
AMCG00011097 NA coding downstream 219633 11039056 ~ 11093828 (+)
AMCG00011096 NA coding downstream 274412 11093835 ~ 11124053 (+)
AMCG00011098 adgrb2 coding downstream 317293 11136716 ~ 11171971 (+)
AMCG00011099 adgrb2,LOC106931923,LOC107082735 coding downstream 400465 11219888 ~ 11252848 (+)
AMCG00011100 NA coding downstream 483641 11303064 ~ 11347011 (+)
G104271 NA non-coding upstream 94798 10723550 ~ 10723890 (+)
G104255 NA non-coding upstream 201492 10555729 ~ 10617196 (+)
G104221 NA non-coding upstream 945798 9872653 ~ 9872890 (+)
G104204 NA non-coding upstream 1071824 9693144 ~ 9746864 (+)
G104150 pabpc4,LOC107721216,LOC107659242 non-coding upstream 1337014 9477567 ~ 9481674 (+)
G104307 col9a2 non-coding downstream 553131 11372554 ~ 11377085 (+)
G104310 NA non-coding downstream 599243 11418666 ~ 11420066 (+)
G104326 NA non-coding downstream 713497 11532920 ~ 11593994 (+)
G104443 NA non-coding downstream 1024987 11844410 ~ 11844623 (+)
G104444 NA non-coding downstream 1025263 11844686 ~ 11845805 (+)
AMCG00011089 csmd2 other upstream 546825 10203617 ~ 10271863 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other upstream 1269168 9530474 ~ 9549520 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 2266083 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 3715180 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 3897757 6892397 ~ 6920931 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 824594 11644017 ~ 11651021 (+)
G104382 NA other downstream 846775 11666198 ~ 11671340 (+)
AMCG00011115 NA other downstream 989423 11808846 ~ 11810822 (+)
G104435 NA other downstream 1022706 11842129 ~ 11844089 (+)
G104550 NA other downstream 1247071 12066494 ~ 12067337 (+)

Expression


Co-expression Network