G104278


Basic Information

Item Value
gene id G104278
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 10946001 ~ 10946274 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130354
ggtactgaccactgcagaccgggaacaccccacaagagctgcagttttggagatgttctgacccagtcgtctagccatcacaatttggcccttgtcaaagtcgctcagatccttactcttgcccatttttcctgcttctaacacatcaactttgaggacaaaatgttcacttgctgcctaatatatcccacccactgacaggtgccatgataacgagattatcagtgttattcacttcacctgtcagtggtcataatgttatggctgatcggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130354 True 274 lncRNA 0.47 1 10946001 10946274

Neighbor

gene id symbol gene type direction distance location
AMCG00011092 NA coding downstream 466853 10459562 ~ 10479148 (-)
AMCG00011085 LOC103394203,LOC106611221,LOC107679991,LOC107081232,LOC101155527,LOC107101634,LOC103461506 coding downstream 1192511 9752696 ~ 9753490 (-)
AMCG00011083 NA coding downstream 1196102 9745248 ~ 9749899 (-)
AMCG00011077 heyl,LOC105919519,LOC108238519,LOC102235766 coding downstream 1429705 9508584 ~ 9516296 (-)
AMCG00011078 NA coding downstream 1446918 9489542 ~ 9499083 (-)
AMCG00011103 NA coding upstream 423426 11369700 ~ 11395747 (-)
AMCG00011104 NA coding upstream 485432 11431706 ~ 11434381 (-)
AMCG00011112 NA coding upstream 706728 11653002 ~ 11661299 (-)
AMCG00011114 NA coding upstream 718850 11665124 ~ 11694330 (-)
AMCG00011113 NA coding upstream 757815 11704089 ~ 11767942 (-)
G104272 NA non-coding downstream 222045 10723590 ~ 10723956 (-)
G104126 NA non-coding downstream 1533079 9410589 ~ 9412922 (-)
G104098 NA non-coding downstream 1680514 9237791 ~ 9265487 (-)
G104055 NA non-coding downstream 1980422 8965372 ~ 8965579 (-)
G104054 NA non-coding downstream 1980720 8964717 ~ 8965281 (-)
G104315 NA non-coding upstream 469916 11416190 ~ 11420103 (-)
G104319 NA non-coding upstream 474475 11420749 ~ 11426225 (-)
G104341 NA non-coding upstream 564949 11511223 ~ 11593619 (-)
G104342 NA non-coding upstream 640784 11587058 ~ 11594342 (-)
G104376 NA non-coding upstream 702731 11649005 ~ 11656833 (-)
AMCG00011086 NA other downstream 1202216 9741133 ~ 9743785 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other downstream 1326722 9601377 ~ 9619279 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 1709773 9222268 ~ 9236228 (-)
AMCG00011051 NA other downstream 2081950 8819551 ~ 8864051 (-)
G103832 NA other downstream 2918970 7938137 ~ 8027031 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 1012964 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 1044555 11990829 ~ 11997786 (-)
AMCG00011135 NA other upstream 1120221 12066495 ~ 12069079 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other upstream 1379823 12326097 ~ 12328282 (-)
AMCG00011152 kcnip1 other upstream 1481719 12427993 ~ 12457327 (-)

Expression


Co-expression Network