G104376


Basic Information

Item Value
gene id G104376
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11649005 ~ 11656833 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130492
aaattattgtgcTTAACAGATTTGTCGATTGGtgtgtgtagggtgtaaatatgatcagATGGATTATGGAAAGAATCCAATTTGACTTTTACTCCAGAGACTGTGCTTAGTAAGTCAGCGAGTCTTGTGCTGGCTGATCCTGCCCCAGcatAAGTATCTGTGTTCCACTCAGAGTTGCAGTGTTAACATCTTATGAATTGGACTCTATAGCACCAGAACTGGGTCAGACTGGGAAACACCCCCCACCTGGCCTTGCAGGTCACGGGCCCCAGCAGAGacgacaaaaacacacagagggagAAAGTGAGGGATTGTGGTTTGGGTTTGTGTCTCATATTACCTGTAACACGAGGACATTTATACAGTTGTTAGATGGAAAACATAAATGACAGGACAGCAGaggaaaaagttaaaaaaaaaaaaaaaaaaacactcacatGCCTTGAATGGGATTCAGTAACTTCAGTACTTTTCAGTCCACCTTGAGCTCTCCATGAACATAACCAGGTCTAATCATTCAATTCATCGCCactactttaaaaaacaaaaatcttaaatttaGCCAAGTgcttttttcattcttgttttgtattattcactAAATCACAACCAACACATAATTAACATCAATTAATCAAAAGTAATTAGATTAAGTTAATGGAGAGGAAGTTAGAATAAAAAGTGGAATTGCAGTAAGCCGCCAGCCCTGGACAATATTTTACAGTACAGAACAGCAGGGTCCCCAGCGCCGGTCCTGGAGACAGACAATTCTTCAGGTTTAATAGGCATCTTCAATCAAGGGCTCAAGAAGTCCCTCCAGAATAGACCACCAGTGTCCAGGACCAGAGCATCCTGCCTCTCACACATCCAACCCCATTGCAAACACCATTttcttagaaaacaaaccaaccagcCATCCCACACTTTTAACtcctttaattacttaattggtcctGCTGCCAAAGATCGATCATTTTAGTGGAcaacttaaaacaaactgacaggAGCGGGGAGAAAGACAGGATACCCTACAGCTGGGAGTGATGGTGCCAGCTGCAGGAAAGggaagtgtgtgtttgcatgtgccTGTAGGAGGGGGGTGCTGGCAGAGTCGGGGTTCGAGAATTGAAAGGGAACGTTGTCGATGGTGCTCTCATTTTCgagagacaaaaatataaaggaaatgacaaaataaaaaatagtctGAGGTGACAACCTAGCTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130492 True 1225 lncRNA 0.42 2 11649005 11656833

Neighbor

gene id symbol gene type direction distance location
AMCG00011104 NA coding downstream 214624 11431706 ~ 11434381 (-)
AMCG00011103 NA coding downstream 253258 11369700 ~ 11395747 (-)
AMCG00011092 NA coding downstream 1169857 10459562 ~ 10479148 (-)
AMCG00011085 LOC103394203,LOC106611221,LOC107679991,LOC107081232,LOC101155527,LOC107101634,LOC103461506 coding downstream 1895515 9752696 ~ 9753490 (-)
AMCG00011083 NA coding downstream 1899106 9745248 ~ 9749899 (-)
AMCG00011114 NA coding upstream 8291 11665124 ~ 11694330 (-)
AMCG00011113 NA coding upstream 47256 11704089 ~ 11767942 (-)
AMCG00011119 NA coding upstream 143928 11800761 ~ 11805757 (-)
AMCG00011118 NA coding upstream 182427 11839260 ~ 11853897 (-)
AMCG00011117 ak2,LOC106570014 coding upstream 198398 11855231 ~ 11860000 (-)
G104342 NA non-coding downstream 54663 11587058 ~ 11594342 (-)
G104341 NA non-coding downstream 55386 11511223 ~ 11593619 (-)
G104319 NA non-coding downstream 222780 11420749 ~ 11426225 (-)
G104315 NA non-coding downstream 228902 11416190 ~ 11420103 (-)
G104278 NA non-coding downstream 702731 10946001 ~ 10946274 (-)
G104449 NA non-coding upstream 6759 11663592 ~ 11697059 (-)
G104513 NA non-coding upstream 320518 11977351 ~ 11978288 (-)
G104545 NA non-coding upstream 382336 12039169 ~ 12039376 (-)
G104568 NA non-coding upstream 419895 12076728 ~ 12144122 (-)
G104591 NA non-coding upstream 479135 12135968 ~ 12142015 (-)
AMCG00011086 NA other downstream 1905220 9741133 ~ 9743785 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other downstream 2029726 9601377 ~ 9619279 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 2412777 9222268 ~ 9236228 (-)
AMCG00011051 NA other downstream 2784954 8819551 ~ 8864051 (-)
G103832 NA other downstream 3621974 7938137 ~ 8027031 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 302405 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 333996 11990829 ~ 11997786 (-)
AMCG00011135 NA other upstream 409662 12066495 ~ 12069079 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other upstream 669264 12326097 ~ 12328282 (-)
AMCG00011152 kcnip1 other upstream 771160 12427993 ~ 12457327 (-)

Expression


Co-expression Network