G104382


Basic Information

Item Value
gene id G104382
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11666198 ~ 11671340 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130500
CACCTATGCGGCCAGGCTTGGTGGAGGTGGGGGTGCCCTGGGCCCCGTTCTCCCCGGACAGAGAGCCACGGCTGGAGTGGAAGGCAGGGCGCTTCAGCTTTGAACCTGAGCTCacctggagagagggaggagagactGGGAGTGTTATTGGGGAACTATATCAGTGTGCGGGTGTCCCACAGTGTGCTGCTGTGTAAGTGTAGCACTATAACAGTGTGTTGGGGTTTtagtgtgtgttattgtgtctgtgtgtgtgagagactggGTTACAgtatccgtgtgtgtgtgtgactttgtCTGTGagtgttgcagtgtgtgaaaatgtctgtgtgtgtgtatgacaatgtgtgtgtgtgtgtgcgcgtctttgagagtgactgtgtgtgtgtgtgtcagtgtcgcAGTACCTCAGTGCTGGCAGTGTGGCTATGCTCAGGGCAGCCGGGGCCCCGGGCCGGAGTGCAGGGTCTGCTGTGAGCGAGCCAGGGCTTGGCATACCCCCGACTCTGAGACACAGGCGTCTGTGAAACGCAAACCAGGAGcgagggagcgagggagcgCAGGGGAcgagtgagagagggggagagagagagagagagagacaggaagggaAGAGTGGAGAAAAAGAGGGAGAAGAAgtgggaaggggaaggggaaaaGGGTGAAGAAAGAGAGACCGAAAGAGACAGAAGGGAGGAAGAAATATagcaagagggagggagggagggagggagggagggagggagggagggaaggaggagggTGGTGTAGTGTATTGGTGCAAGATGGACATGTGAAGAACGGAACGGGAAAACCAGCAGTGAAGGAGAGGCGCAGGGAGCAGCAGAGGACAACAGAgcgaaacaaaacagaaacgaGAACAAATGAAAACTCCGCAGAGACCTGGACACACAGAGCAATGAGACAAGCTACACATACTACACAGACACATGCTACCCACACATTGATACACTCTCACAAACACCCTACCCACATacactgacactctcacacacacaaaactgaacCACACGCTGAAAAACAACACTGtacccacacacactctccccaCCCATTAATTGTCATACCTCGAGCCAGAACACTCTCTCTGCAGCTCTTCCTCTCCCTACGTTAgccagtctctctctgtccacatGACAGCAGACGTGACATTACACAATGACTGGGACGACCAAGATGAGGGGCCACGCAAACACGGTatttacatatgtgtgtgtatgtgtgtgtgtgcacgcgcGCACTTGTGTATGTTGTATGCATTCCCTTCCcagccctccctctctccccatccctctccTCACCCTGGCTCCGCTGGTGGGCGTTGCTGGGGACGACGGTATGGAGGCGGCACTCTGGTTGCTATGGCTGGCACTGGAACTGGAGCGGGTTGGGGAGGCAGCACGCGAGCCCGGCTTTGACCTCCGACCCCGTGACCTGAAGGCTGCCAGTCCCTGGGAGGCCCCCTCGGGCAAGATGAACTTCTCCCGAAGTTCAAGGTTTGTGCGACCGCgcgctggagagagagagagagagagagagaaagaaagacagggttgggggagggggtagagtgagagaaggagggagagagtgggagagatgAGGAAGAGAGGGTGGGTTGATGAatgagggagagaaacagataAAAGGGAGAGGGAAACGAGGTGGAGATAGGAGGAGTAGTGCAGTGAAGAagaagagaggaagggaggacATGGAGGGTCACAGGGGAGCAGGGtggagaagagaaaagaaaagagggggagagaggagaaactCAGTTAAAGTCCATGGCAGAATTACATGTCTCACTCTGCTATGTCCCAGTACACACTTCCCAGGGTTAAAAGGCCAGAAACACTGAAAGCCAAAGTTAAAacgaaaataaactaaaaaatacgtacattaatgtttattatttttaattacaattaaaaagcaatcaatacttaaattaatcaattacttttCTGTTAATACAACACATTCAGCCAGTGCCTCACTGTGCAGCAGTCAAactagagagagaaagagagagtgtggggAAAGGTTTCAGAGCAAGAAAGAGTGATAGGAAGACTGAATTAGAGAATGAGATTGAGAGAGAGTAGGAGGTTTTTAgagtgtatgtgagagagagagaggaaatgggattgagatggagaaaGATCGCGAGAGTGATACCGTGAGACAGAGACACCAAAGGAAAGAAAGcgagagagaagaaagagagcTTCAGCCCAGCAGTGAGATCAACAAGAGCAGCAGCCCCAGATTGAGGGTCAGTCAGCCAGGCAGCATCATTAGCTGGTTTAATAAGTAATGAGTTAATTGATTAACGAGCCATTCTCAGCccagcacagacacaggcagCTGTCTGCAGCAGGCTGGCCAGGAAAGGGTTAACCAGTCACCttataatcatcataataataataatgtgtatattgtttgcagtgtgttgaaagttttctatttaaaagacaaactAGACAACAACTTTAGCAAGACACAACAGCACAGTCTGGGCCCCTGAGCTCTGTCTCAATTGCCCCAATGCCCCATAACAATCACTCCCTGCCACCCCACTGACAGAGCTCCACTGCACTATTGCCTCACTGCCCCACAGCTCCACTGGAAATTGCCTCCCTGCGCCAGAGCCAAATTGCCTCACTGCAAACTGCCCCAACCCTGCCCCAGAGCCCCACTGCGCCACAGCAAACTGCCCTCCTGCCCCAGAGCCAGACCCAGAGAGGAAATACCTCTACAGCAGAAATACCCCGGAGTCACTGTCACTGTggtaaaacaacacacagacaacagtgTGAGATTTACAGACGGACAGACACCCAAACAACAGAATGACATATACATaggtagacagacagacagacaacagaGTGAGGTatagatagacacacacagacaacacagagaaagagacagacacacacagacaacagagagagagagggacagaaaacagatatacagatacagacaggtagacaagacagacaacagagagatatacagacagacacacacagacaacagtgTGTGATATAGACAGGTagacagacaacacacagattacactgacacaacacagatacacagacaacAGTGAGacttacagacacacagagtgaGATATACAGACTCgcatagacagacacagacacatagagaaagacacacaatacacagaaacacagacagagtgTCATAGACATTGAGACAAAGAGAGACTCGGACTCAACCAGAGAGAGACATACAccgacacagacaaacacaaagacagagagagagaccttaAGTTTACTCAAACAGAAATCTTTAACCCTTTGCTTTCCTGGGTAGCTGTACAACAAGCCTCTGAAAAGATCTCACCTAACAAGAGTACACCTGCCTAAGACACACCTGTTCACACTGACCTGTGACCAATCAGTCCTCCCCCCTAGGCTGAAGTGTTCATTCACACTGTAGTGTCAATGTCTAACTCAACAGTCCCTGCTGTTGCTGCTCATGATCAGAAGCGTAGTGTGACTTTTCTCCAGGCAAGAGACATTCCCACTATTAACTGTACCAACTCCAGCAACAACATTCTCCACTGGGAGGGGTGATTATCAgacatgtgagtgtgtgtgtattagaatttgagagagagtgagagaaagagaggagagagaggagcagcCGACCTATTGGACGGTGGCTGGGAATGGAGCTGCTGGATTCGGACCGAGGGATTTTATTTCCAGGATGAtgcactggagagagagagagaaagaaagggagagagagagataacgaCTCTCTACTGAAAGACAGTGCGCatgtgggagggagagagagggagcgagcagtaaaaacaatatgcaactgagtgagagagagaaagaaagagagcagagaggaggaggaagacatcCAGCCACTGAGACAGGAgggatagaaagaaagaaaggatgaaaaaaaggaaaaggaaaggatTGTATGAgcccagcagagagagaaaaagacagactgaaaaacagaataagagaggaagaaaggatatgaaagacagaaagatgGAAGGAGAGGTATAGATAAATGTGAGCAGAGAAAGagtaagacagagagagaggagaggagaggctgAGTTCCAGAACAGAGTGACCAACTGATTGAtgaattagtgtgtgtgtgtgtgtgtgtgagagggtcTCTATTGGcacaggaatgtgtgtgtgtgtgtctgtctgtctataggCGTCTCTGTCCCCGTcagtgggcagcagtgtgggtCACTCTGGCCTtccacatccctctctctctttgcgtgtgcgtgtgtgtgtgtgtgagttggaGGCGTGTGTGACCACTCACCTCGGCAGGGGTCGTTTTTCACCAGGAACTCATCCAGTGCCATCCAGCCCCCACCCACGCGCACCATCACTGTGCTGCGCAGAATACGAACCAGACGCAGCTGCTGAGAGTCCccaaactgagagagagagagagataaagtgTTATATTAAGAAACCCAACaccattattataataacaataatactaataataataataataataattcatgcaCTAAGAAGCACATGCAGGCAGATGAGATTAATGTCCAGGCCCAGACTGTAACCCAGGTCCCcccaccgcaccgcaccgcaccacaccacaccacccTCAGCAGCTATAAGTTcacttgcatttttaattgttcaGCCATTAAACTTCAGCAATTAAAACATACcgtacacacaaacataaataattaaacaaatcaataaataatagttgAAATCTGTAATAATTGAGGAGCTGAAAACTCTTCAAATGAAAAgtccaattaaaaaacaatttgcagatcaattaataaatgaagggagctcagctgagttcacaaaatcacaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130500 True 4935 TUCP 0.49 2 11666198 11671340

Neighbor

gene id symbol gene type direction distance location
AMCG00011111 NA coding upstream 23971 11638002 ~ 11642227 (+)
AMCG00011108 NA coding upstream 78992 11574540 ~ 11587206 (+)
AMCG00011105 kcnq4 coding upstream 113220 11542988 ~ 11552978 (+)
AMCG00011107 NA coding upstream 135469 11527210 ~ 11530729 (+)
AMCG00011109 kcnq4 coding upstream 165928 11499565 ~ 11500270 (+)
AMCG00011116 NA coding downstream 162504 11833844 ~ 11839029 (+)
AMCG00011122 NA coding downstream 272259 11943599 ~ 11946001 (+)
AMCG00011121 eef1a1l2,LOC107589444,LOC107706209,LOC105892153,LOC105027913 coding downstream 291058 11962398 ~ 11966995 (+)
AMCG00011120 ppt1,LOC107696568,LOC107591677,LOC107697049,LOC107706207,LOC107589449 coding downstream 315522 11986862 ~ 11988912 (+)
AMCG00011133 NA coding downstream 362957 12034297 ~ 12038373 (+)
G104326 NA non-coding upstream 72204 11532920 ~ 11593994 (+)
G104310 NA non-coding upstream 246132 11418666 ~ 11420066 (+)
G104307 col9a2 non-coding upstream 289113 11372554 ~ 11377085 (+)
G104271 NA non-coding upstream 942308 10723550 ~ 10723890 (+)
G104255 NA non-coding upstream 1049002 10555729 ~ 10617196 (+)
G104443 NA non-coding downstream 173070 11844410 ~ 11844623 (+)
G104444 NA non-coding downstream 173346 11844686 ~ 11845805 (+)
G104445 NA non-coding downstream 174648 11845988 ~ 11846253 (+)
G104479 NA non-coding downstream 243154 11914494 ~ 11917031 (+)
G104480 NA non-coding downstream 246348 11917688 ~ 11918147 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other upstream 15177 11644017 ~ 11651021 (+)
G104273 NA other upstream 846775 10818688 ~ 10819423 (+)
AMCG00011089 csmd2 other upstream 1394335 10203617 ~ 10271863 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other upstream 2116678 9530474 ~ 9549520 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 3113593 8548363 ~ 8552605 (+)
AMCG00011115 NA other downstream 137506 11808846 ~ 11810822 (+)
G104435 NA other downstream 170789 11842129 ~ 11844089 (+)
G104550 NA other downstream 395154 12066494 ~ 12067337 (+)
AMCG00011141 LOC567622,LOC108413244,LOC103367052,LOC101466533,LOC107379323 other downstream 396111 12067451 ~ 12140465 (+)
G104694 NA other downstream 854020 12525360 ~ 12527031 (+)

Expression


Co-expression Network