G104443


Basic Information

Item Value
gene id G104443
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11844410 ~ 11844623 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130570
GCGGGCAGTAGGCGGAGCTCAGGGAGCCGGCCATGGCACGGGTGCTGGCACAGTCACTCCCCCCGCCAACGCTGCCAGAGTCCCGTGGAGCTTCCTGCAGCACCCCACTCACCTGCACCTGCAgcctgggggagagaggagagaggagagagaagagaggacaGAGGGGTCGGTTACAGTCGGATTCTACATGGGCtgacattcacacacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130570 True 214 lncRNA 0.64 1 11844410 11844623

Neighbor

gene id symbol gene type direction distance location
AMCG00011116 NA coding upstream 5381 11833844 ~ 11839029 (+)
AMCG00011111 NA coding upstream 202183 11638002 ~ 11642227 (+)
AMCG00011108 NA coding upstream 257204 11574540 ~ 11587206 (+)
AMCG00011105 kcnq4 coding upstream 291432 11542988 ~ 11552978 (+)
AMCG00011107 NA coding upstream 313681 11527210 ~ 11530729 (+)
AMCG00011122 NA coding downstream 98976 11943599 ~ 11946001 (+)
AMCG00011121 eef1a1l2,LOC107589444,LOC107706209,LOC105892153,LOC105027913 coding downstream 117775 11962398 ~ 11966995 (+)
AMCG00011120 ppt1,LOC107696568,LOC107591677,LOC107697049,LOC107706207,LOC107589449 coding downstream 142239 11986862 ~ 11988912 (+)
AMCG00011133 NA coding downstream 189674 12034297 ~ 12038373 (+)
AMCG00011134 NA coding downstream 200412 12045035 ~ 12050580 (+)
G104326 NA non-coding upstream 250416 11532920 ~ 11593994 (+)
G104310 NA non-coding upstream 424344 11418666 ~ 11420066 (+)
G104307 col9a2 non-coding upstream 467325 11372554 ~ 11377085 (+)
G104271 NA non-coding upstream 1120520 10723550 ~ 10723890 (+)
G104255 NA non-coding upstream 1227214 10555729 ~ 10617196 (+)
G104444 NA non-coding downstream 63 11844686 ~ 11845805 (+)
G104445 NA non-coding downstream 1365 11845988 ~ 11846253 (+)
G104479 NA non-coding downstream 69871 11914494 ~ 11917031 (+)
G104480 NA non-coding downstream 73065 11917688 ~ 11918147 (+)
G104483 NA non-coding downstream 75251 11919874 ~ 11921197 (+)
G104435 NA other upstream 321 11842129 ~ 11844089 (+)
AMCG00011115 NA other upstream 33588 11808846 ~ 11810822 (+)
G104382 NA other upstream 173070 11666198 ~ 11671340 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other upstream 193389 11644017 ~ 11651021 (+)
G104273 NA other upstream 1024987 10818688 ~ 10819423 (+)
G104550 NA other downstream 221871 12066494 ~ 12067337 (+)
AMCG00011141 LOC567622,LOC108413244,LOC103367052,LOC101466533,LOC107379323 other downstream 222828 12067451 ~ 12140465 (+)
G104694 NA other downstream 680737 12525360 ~ 12527031 (+)
G104719 NA other downstream 765506 12610129 ~ 12619055 (+)
AMCG00011163 reep2,LOC107557670,LOC107588406 other downstream 825753 12670376 ~ 12679429 (+)

Expression


Co-expression Network