G104545


Basic Information

Item Value
gene id G104545
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 12039169 ~ 12039376 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130718
tgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcgtatggggctgcgtagccgcagaccagtcagggtgcctatgctgacccctgtccactgccgaaagcgcctacaatgggcacgtgagcatcagaactggaccacggagcaatgaaAGAAgttggcctggtctgatgaatcacgagttcaaggtgttgacttggcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130718 True 208 lncRNA 0.54 1 12039169 12039376

Neighbor

gene id symbol gene type direction distance location
AMCG00011137 LOC107589451,LOC104962793 coding downstream 5770 12015153 ~ 12033399 (-)
AMCG00011138 NA coding downstream 30216 12004096 ~ 12008953 (-)
AMCG00011129 NA coding downstream 54361 11978953 ~ 11984808 (-)
AMCG00011128 NA coding downstream 80861 11952116 ~ 11958308 (-)
AMCG00011131 rpl11,LOC106570028,LOC107589447,LOC107591640 coding downstream 88169 11948240 ~ 11951000 (-)
AMCG00011139 psmb2,LOC107591978,LOC107592948,LOC107688376 coding upstream 14262 12053638 ~ 12059625 (-)
AMCG00011136 NA coding upstream 32291 12071667 ~ 12085428 (-)
AMCG00011150 NA coding upstream 226131 12265507 ~ 12275549 (-)
AMCG00011149 NA coding upstream 261409 12300785 ~ 12306207 (-)
AMCG00011151 NA coding upstream 348887 12388263 ~ 12402070 (-)
G104513 NA non-coding downstream 60881 11977351 ~ 11978288 (-)
G104449 NA non-coding downstream 342110 11663592 ~ 11697059 (-)
G104376 NA non-coding downstream 382336 11649005 ~ 11656833 (-)
G104342 NA non-coding downstream 444827 11587058 ~ 11594342 (-)
G104341 NA non-coding downstream 445550 11511223 ~ 11593619 (-)
G104568 NA non-coding upstream 37352 12076728 ~ 12144122 (-)
G104591 NA non-coding upstream 96592 12135968 ~ 12142015 (-)
G104598 NA non-coding upstream 117066 12156442 ~ 12156731 (-)
G104660 NA non-coding upstream 335691 12375067 ~ 12379667 (-)
G104665 NA non-coding upstream 362988 12402364 ~ 12402564 (-)
AMCG00011140 NA other downstream 41383 11990829 ~ 11997786 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other downstream 68167 11959238 ~ 11971002 (-)
AMCG00011086 NA other downstream 2295384 9741133 ~ 9743785 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other downstream 2419890 9601377 ~ 9619279 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 2802941 9222268 ~ 9236228 (-)
AMCG00011135 NA other upstream 27119 12066495 ~ 12069079 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other upstream 286721 12326097 ~ 12328282 (-)
AMCG00011152 kcnip1 other upstream 388617 12427993 ~ 12457327 (-)
G104715 NA other upstream 508913 12548289 ~ 12548993 (-)
G104749 NA other upstream 595480 12634856 ~ 12640227 (-)

Expression


Co-expression Network