G104598


Basic Information

Item Value
gene id G104598
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 12156442 ~ 12156731 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130789
tatatatatatatatatatatatatatatatatatatatatatatatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaatcaaccaatcacatggcaattgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgttctgctttgtccaataacttcaatgctcctggaagttggggtttcacgaaagtagagtcttttccaaacagattttccactggtttgaag

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04727 GABAergic synapse
ko04723 Retrograde endocannabinoid signaling
ko05032 Morphine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU130789 True 290 lncRNA 0.33 1 12156442 12156731

Neighbor

gene id symbol gene type direction distance location
AMCG00011136 NA coding downstream 71014 12071667 ~ 12085428 (-)
AMCG00011139 psmb2,LOC107591978,LOC107592948,LOC107688376 coding downstream 96817 12053638 ~ 12059625 (-)
AMCG00011137 LOC107589451,LOC104962793 coding downstream 123043 12015153 ~ 12033399 (-)
AMCG00011138 NA coding downstream 147489 12004096 ~ 12008953 (-)
AMCG00011129 NA coding downstream 171634 11978953 ~ 11984808 (-)
AMCG00011150 NA coding upstream 108776 12265507 ~ 12275549 (-)
AMCG00011149 NA coding upstream 144054 12300785 ~ 12306207 (-)
AMCG00011151 NA coding upstream 231532 12388263 ~ 12402070 (-)
AMCG00011159 NA coding upstream 340616 12497347 ~ 12499099 (-)
AMCG00011154 NA coding upstream 349083 12505814 ~ 12507945 (-)
G104568 NA non-coding downstream 12320 12076728 ~ 12144122 (-)
G104591 NA non-coding downstream 14427 12135968 ~ 12142015 (-)
G104545 NA non-coding downstream 117066 12039169 ~ 12039376 (-)
G104513 NA non-coding downstream 178154 11977351 ~ 11978288 (-)
G104449 NA non-coding downstream 459383 11663592 ~ 11697059 (-)
G104660 NA non-coding upstream 218336 12375067 ~ 12379667 (-)
G104665 NA non-coding upstream 245633 12402364 ~ 12402564 (-)
G104680 NA non-coding upstream 273234 12429965 ~ 12493101 (-)
G104697 NA non-coding upstream 367106 12523837 ~ 12524358 (-)
G104776 NA non-coding upstream 604314 12761045 ~ 12763667 (-)
AMCG00011135 NA other downstream 87363 12066495 ~ 12069079 (-)
AMCG00011140 NA other downstream 158656 11990829 ~ 11997786 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other downstream 185440 11959238 ~ 11971002 (-)
AMCG00011086 NA other downstream 2412657 9741133 ~ 9743785 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other downstream 2537163 9601377 ~ 9619279 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other upstream 169366 12326097 ~ 12328282 (-)
AMCG00011152 kcnip1 other upstream 271262 12427993 ~ 12457327 (-)
G104715 NA other upstream 391558 12548289 ~ 12548993 (-)
G104749 NA other upstream 478125 12634856 ~ 12640227 (-)
AMCG00011169 NA other upstream 664294 12821025 ~ 12826880 (-)

Expression


Co-expression Network