G104680


Basic Information

Item Value
gene id G104680
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 12429965 ~ 12493101 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130906
TATTtgaattaagttatttatattaaaaaaaaaacaataacatcatAGTTTGCAATACAGGATGTCTGGGGATGGGACGGGACTGCAGGGTGACAACAGAACACAGGCAGTGGGGACTGAGCTCTACACAACAGATACCCGAAGCTGAGCTGCAGTctttatctctctatctatctatctatctatctatctatctatctatctatctatctattgtCCTGTGTTTAACACTTGAATTGGTTCAGTTTACGACAGGTTTGGATGACTGGATCTCTGAGAggaacacacactcacactgacacacagacacacacacacacacacacacacacacacacaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130906 True 342 lncRNA 0.41 2 12429965 12493101

Neighbor

gene id symbol gene type direction distance location
AMCG00011151 NA coding downstream 27895 12388263 ~ 12402070 (-)
AMCG00011149 NA coding downstream 123758 12300785 ~ 12306207 (-)
AMCG00011150 NA coding downstream 154416 12265507 ~ 12275549 (-)
AMCG00011136 NA coding downstream 344537 12071667 ~ 12085428 (-)
AMCG00011139 psmb2,LOC107591978,LOC107592948,LOC107688376 coding downstream 370340 12053638 ~ 12059625 (-)
AMCG00011159 NA coding upstream 4246 12497347 ~ 12499099 (-)
AMCG00011154 NA coding upstream 12713 12505814 ~ 12507945 (-)
AMCG00011157 nhp2,LOC107673822,LOC107590037,LOC107684699,LOC107715316,LOC106603897 coding upstream 17723 12510824 ~ 12527131 (-)
AMCG00011156 NA coding upstream 36729 12529830 ~ 12541377 (-)
AMCG00011155 cdc23,LOC107692994,LOC106603039 coding upstream 58107 12551208 ~ 12556643 (-)
G104665 NA non-coding downstream 27401 12402364 ~ 12402564 (-)
G104660 NA non-coding downstream 50298 12375067 ~ 12379667 (-)
G104598 NA non-coding downstream 273234 12156442 ~ 12156731 (-)
G104568 NA non-coding downstream 285843 12076728 ~ 12144122 (-)
G104591 NA non-coding downstream 287950 12135968 ~ 12142015 (-)
G104697 NA non-coding upstream 30736 12523837 ~ 12524358 (-)
G104776 NA non-coding upstream 267944 12761045 ~ 12763667 (-)
G104845 NA non-coding upstream 435571 12928672 ~ 12931083 (-)
G104846 NA non-coding upstream 442381 12935482 ~ 12940160 (-)
G104915 NA non-coding upstream 883032 13376133 ~ 13376997 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other downstream 101683 12326097 ~ 12328282 (-)
AMCG00011135 NA other downstream 360886 12066495 ~ 12069079 (-)
AMCG00011140 NA other downstream 432179 11990829 ~ 11997786 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other downstream 458963 11959238 ~ 11971002 (-)
AMCG00011086 NA other downstream 2686180 9741133 ~ 9743785 (-)
G104715 NA other upstream 55188 12548289 ~ 12548993 (-)
G104749 NA other upstream 141755 12634856 ~ 12640227 (-)
AMCG00011169 NA other upstream 327924 12821025 ~ 12826880 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other upstream 449289 12942390 ~ 12956267 (-)
G104909 NA other upstream 871982 13365083 ~ 13367074 (-)

Expression


Co-expression Network